BLASTX nr result

ID: Atractylodes21_contig00039525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039525
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptas...   114   1e-23
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga...   108   4e-22
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...   107   1e-21
ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula] g...   105   4e-21

>ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|222840624|gb|EEE78171.1|
           predicted protein [Populus trichocarpa]
          Length = 677

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/117 (47%), Positives = 72/117 (61%)
 Frame = +1

Query: 28  ILKCFEFASGLKVNMSKSKLFGIGVCMEDLAIMAASLGCDYSSLPFTYLGLPIGCNMKKV 207
           IL CFE  SGLKVN  KS + G+G+        A  L C    LP TYLGLPIG NM ++
Sbjct: 49  ILLCFELLSGLKVNFYKSSIIGVGIEDHVCRYSAQILRCKQEQLPITYLGLPIGANMNRI 108

Query: 208 AYWEPIVTKFQSRLASWKARLISSSGCLTLVRPVLSNLALYFFSLYRSPAKLLTVLE 378
           + W+PI+     RLA+WK R +S  G L L++ VLSNL +Y+ SL+  PA + T +E
Sbjct: 109 SMWKPIIRNISCRLAAWKGRFLSIGGRLCLLKSVLSNLPIYYLSLFPMPATVATTIE 165


>gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 391

 Score =  114 bits (284), Expect = 1e-23
 Identities = 57/126 (45%), Positives = 82/126 (65%)
 Frame = +1

Query: 7   NFRYLMGILKCFEFASGLKVNMSKSKLFGIGVCMEDLAIMAASLGCDYSSLPFTYLGLPI 186
           N R L  +L  FE  SGLK+N  KS L G+ V    L   A+ L C   SLPFTYLGLPI
Sbjct: 104 NVRALRTVLILFEAVSGLKINFHKSLLVGVNVADSWLTEAASLLNCKVGSLPFTYLGLPI 163

Query: 187 GCNMKKVAYWEPIVTKFQSRLASWKARLISSSGCLTLVRPVLSNLALYFFSLYRSPAKLL 366
           G N +++++WEP+V + +SRL+SW++R +S  G L LV+ VLS L +Y  S +++PA  +
Sbjct: 164 GGNPRRLSFWEPVVHRIKSRLSSWQSRFLSFGGRLILVKSVLSALPVYALSFFKAPAGTI 223

Query: 367 TVLEGI 384
           + ++ I
Sbjct: 224 SSIDSI 229


>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score =  108 bits (270), Expect = 4e-22
 Identities = 55/126 (43%), Positives = 82/126 (65%), Gaps = 3/126 (2%)
 Frame = +1

Query: 7    NFRYLMGILKC---FEFASGLKVNMSKSKLFGIGVCMEDLAIMAASLGCDYSSLPFTYLG 177
            N  YL+ I K    F+ ASGL+VN  KS + GI V    L   A +L C    LPFTYLG
Sbjct: 689  NLDYLLNIKKTLILFQLASGLQVNFHKSSIMGIHVDEIWLQEAANALLCKVGRLPFTYLG 748

Query: 178  LPIGCNMKKVAYWEPIVTKFQSRLASWKARLISSSGCLTLVRPVLSNLALYFFSLYRSPA 357
            LPIG N+ ++A+W+PI+ K + +LASWK R++S +G +TL++  +S+L LY+ SL+ +P 
Sbjct: 749  LPIGGNISRLAHWDPIIKKIEGKLASWKGRMLSIAGRITLIKASISSLPLYYMSLFPAPR 808

Query: 358  KLLTVL 375
             ++  +
Sbjct: 809  GVIEAI 814


>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/109 (47%), Positives = 72/109 (66%)
 Frame = +1

Query: 40   FEFASGLKVNMSKSKLFGIGVCMEDLAIMAASLGCDYSSLPFTYLGLPIGCNMKKVAYWE 219
            F+ ASGL+VN  KS L G+ V    L   A  L C    LPFTYLGLPIG N+ +++ W+
Sbjct: 703  FQLASGLQVNFHKSSLLGVNVHENLLNDFAKHLLCKVGKLPFTYLGLPIGGNITRLSLWD 762

Query: 220  PIVTKFQSRLASWKARLISSSGCLTLVRPVLSNLALYFFSLYRSPAKLL 366
            P+++K + +LASWK+ L+S  G LTL++  LSNL LY+ SL+  P  +L
Sbjct: 763  PVISKLEKKLASWKSNLLSIGGRLTLIKACLSNLPLYYMSLFPIPKGVL 811


>ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
            gi|355501725|gb|AES82928.1| Receptor-like kinase
            [Medicago truncatula]
          Length = 2313

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/126 (39%), Positives = 81/126 (64%)
 Frame = +1

Query: 7    NFRYLMGILKCFEFASGLKVNMSKSKLFGIGVCMEDLAIMAASLGCDYSSLPFTYLGLPI 186
            N R +  +L  FE  SGLKVN  KS L G+ +    LA  +  + C   S+PF YLGLPI
Sbjct: 1236 NVRSMRAVLVLFEEMSGLKVNFHKSMLTGVNINESWLAEASMVMNCRRGSIPFVYLGLPI 1295

Query: 187  GCNMKKVAYWEPIVTKFQSRLASWKARLISSSGCLTLVRPVLSNLALYFFSLYRSPAKLL 366
            G + +K+++W+P++    +RL+SW  + +S  G L L++ VLS+L +YF S +++PA ++
Sbjct: 1296 GGDSRKLSFWKPVINCIVARLSSWNNKFLSFGGRLVLLKFVLSSLPVYFLSFFKAPAGII 1355

Query: 367  TVLEGI 384
            +++E I
Sbjct: 1356 SLIESI 1361


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