BLASTX nr result

ID: Atractylodes21_contig00039463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039463
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    59   4e-07
gb|AER13160.1| putative non-LTR retroelement [Phaseolus vulgaris]      59   5e-07
ref|XP_003618107.1| hypothetical protein MTR_5g099050 [Medicago ...    58   9e-07
emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]    57   2e-06
ref|XP_003622970.1| Pantothenate synthetase [Medicago truncatula...    55   8e-06

>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 44/141 (31%), Positives = 60/141 (42%), Gaps = 11/141 (7%)
 Frame = -1

Query: 455  DSWTWNLDSKGEFTVKALR----------RLIEGGIPVRDMLYDRGIEVDSRLCPRCGNS 306
            D   WN  S G++T+  L           R I   +P R  L  RG+++D   CPRC   
Sbjct: 1348 DKLVWNYSSSGDYTLWKLPIIPKIKYMLWRTISKALPTRSRLLTRGMDIDPH-CPRCPTE 1406

Query: 305  IETFRHCFVECIHSLSCW-RSIFRWWGWDFGTTSSFEEILESPNSRGLSGNLYEAWRAVL 129
             ET  H    C ++ S W  S F W      +  + E I    NS   +  L    R   
Sbjct: 1407 EETINHVLFTCPYAASIWGLSNFPWLPGHTFSQDTEENISFLINSFS-NNTLNTEQRLAP 1465

Query: 128  FVAFYLLWFSRNHLVFDKQRE 66
            F   + LW +RN+LVF+K  E
Sbjct: 1466 FWLIWRLWKARNNLVFNKFSE 1486


>gb|AER13160.1| putative non-LTR retroelement [Phaseolus vulgaris]
          Length = 216

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/150 (26%), Positives = 67/150 (44%)
 Frame = -1

Query: 452 SWTWNLDSKGEFTVKALRRLIEGGIPVRDMLYDRGIEVDSRLCPRCGNSIETFRHCFVEC 273
           ++ WN  +       A R L+   IP R+ L  RGI+++S  C  C    E+ +H F+EC
Sbjct: 26  AYIWNAKAFPSVLTTAWRVLVNR-IPTREGLSRRGIQLNSIACVLCQIKEESCQHLFIEC 84

Query: 272 IHSLSCWRSIFRWWGWDFGTTSSFEEILESPNSRGLSGNLYEAWRAVLFVAFYLLWFSRN 93
           +++   W    +W G  F   +  ++   S +    S       + V       +W  RN
Sbjct: 85  LYAKQVWSLCLKWLGILFVQHNDLKDHFVSFHIAQASSKQNLVLKGVWAAIVRCIWDQRN 144

Query: 92  HLVFDKQREYHPLDLVFEVKLKSFFWISHR 3
            ++F KQ      ++    +LKS+ W+ HR
Sbjct: 145 TILF-KQGVVDVEEIFQMAQLKSWLWMKHR 173


>ref|XP_003618107.1| hypothetical protein MTR_5g099050 [Medicago truncatula]
           gi|355519442|gb|AET01066.1| hypothetical protein
           MTR_5g099050 [Medicago truncatula]
          Length = 332

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 18/168 (10%)
 Frame = -1

Query: 461 VNDSWTWNLD---------------SKGEFTVKALRRLIEGGIPVRDMLYDRGI--EVDS 333
           V D+W W LD               + GE T ++    I   +P +D L  R +    D+
Sbjct: 141 VEDTWRWLLDPVHGYSARGAYRFLTTTGELTSRSQAIDIWLKLPTKDNLVRRNVLSHNDA 200

Query: 332 RLCPRCGNSIETFRHCFVECIHSLSCWRSIFRWWGWDFGTTSSF-EEILESPNSRGLSGN 156
                CG+S E   H F++C    S W  ++ W G    T     ++ ++  N  GL  +
Sbjct: 201 ACVSGCGSS-ELATHLFLDCDLFGSLWSHVWLWLGIPSVTPGDLHQQFIQFINMSGLPKS 259

Query: 155 LYEAWRAVLFVAFYLLWFSRNHLVFDKQREYHPLDLVFEVKLKSFFWI 12
            +  ++ + F + +++W  RN  VF+ +    P  L+ + KL SF W+
Sbjct: 260 THTFFKVIWFTSVWIIWKERNDRVFNNKASI-PSFLIEKFKLTSFLWL 306


>emb|CAN81954.1| hypothetical protein VITISV_014020 [Vitis vinifera]
          Length = 1045

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 14/141 (9%)
 Frame = -1

Query: 461 VNDSWTWNLDSKGEFTVKALRRLIEGGIPVR--------------DMLYDRGIEVDSRLC 324
           V D+ +W     G+F+VK+L   +E G  +               DM+  RG  + +R C
Sbjct: 167 VEDTVSWTETKSGKFSVKSLYIALEAGPKISFFAWEATWGKALTLDMVQKRGWALANR-C 225

Query: 323 PRCGNSIETFRHCFVECIHSLSCWRSIFRWWGWDFGTTSSFEEILESPNSRGLSGNLYEA 144
             C    E   H  + C  + + W  +F  +G  +    S  E L S N   L  N  +A
Sbjct: 226 FMCLEKEENINHLLLHCSRTRALWDLLFALFGVSWVLPFSVRETLLSWNGFFLGKNRKKA 285

Query: 143 WRAVLFVAFYLLWFSRNHLVF 81
           WRA     F+ +W  RN L F
Sbjct: 286 WRAAPLHIFWTVWKERNRLAF 306


>ref|XP_003622970.1| Pantothenate synthetase [Medicago truncatula]
           gi|355497985|gb|AES79188.1| Pantothenate synthetase
           [Medicago truncatula]
          Length = 551

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
 Frame = -1

Query: 326 CPRCGNSIETFRHCFVECIHSLSCWRSIFRWWGWDFGTTSSFEEILESPNSRGLSGNLYE 147
           C  CG   E+  H F+ C  +   WR +  W    F T  +     ES N    S  L +
Sbjct: 295 CVLCGQREESSTHLFLHCEVAAKIWRGVLNWLDM-FITPQNLYVHFESWNGEATSKRLLK 353

Query: 146 AWRAVLFVAFYLLWFSRNHLVFDKQREYHPLD-LVFEVKLKSFFWISHR 3
            +R +     +L+W  RN  +F  Q  +  +D ++ E+K+ S+FW+  R
Sbjct: 354 GFRLIWHATIWLIWKERNAKIFKNQ--FKEVDEIIDEIKVLSWFWVLSR 400


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