BLASTX nr result

ID: Atractylodes21_contig00039455 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039455
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding prot...    86   2e-15
ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding prot...    86   2e-15
gb|ABK95931.1| unknown [Populus trichocarpa]                           85   5e-15
ref|XP_003621261.1| Polypyrimidine tract-binding protein-like pr...    81   1e-13
ref|XP_003621260.1| Polypyrimidine tract-binding protein-like pr...    81   1e-13

>ref|XP_002283752.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 2
           [Vitis vinifera]
          Length = 420

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/51 (88%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
 Frame = -2

Query: 203 LIQFTDAEIASSAREALDW-SIPRYFLLEHVGSCHLRISYSAHTDLNIKFQ 54
           LIQFTDAE ASSAR ALD  SIPRY L EHVGSCHLRISYSAHTDLNIKFQ
Sbjct: 125 LIQFTDAETASSARNALDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQ 175


>ref|XP_002283748.1| PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform 1
           [Vitis vinifera] gi|296082938|emb|CBI22239.3| unnamed
           protein product [Vitis vinifera]
          Length = 449

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 45/51 (88%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
 Frame = -2

Query: 203 LIQFTDAEIASSAREALDW-SIPRYFLLEHVGSCHLRISYSAHTDLNIKFQ 54
           LIQFTDAE ASSAR ALD  SIPRY L EHVGSCHLRISYSAHTDLNIKFQ
Sbjct: 154 LIQFTDAETASSARNALDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQ 204


>gb|ABK95931.1| unknown [Populus trichocarpa]
          Length = 473

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/51 (86%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
 Frame = -2

Query: 203 LIQFTDAEIASSAREALDW-SIPRYFLLEHVGSCHLRISYSAHTDLNIKFQ 54
           LIQFTD+E ASSAR ALD  SIPRY L EHVGSCHLRISYSAHTDLNIKFQ
Sbjct: 154 LIQFTDSETASSARNALDGRSIPRYLLPEHVGSCHLRISYSAHTDLNIKFQ 204


>ref|XP_003621261.1| Polypyrimidine tract-binding protein-like protein [Medicago
           truncatula] gi|355496276|gb|AES77479.1| Polypyrimidine
           tract-binding protein-like protein [Medicago truncatula]
          Length = 592

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/51 (82%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
 Frame = -2

Query: 203 LIQFTDAEIASSAREALDW-SIPRYFLLEHVGSCHLRISYSAHTDLNIKFQ 54
           LIQFTDAE A+SAR+ALD  SIPRY L EHVGSC+LRISYSAH DLNIKFQ
Sbjct: 421 LIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLRISYSAHRDLNIKFQ 471


>ref|XP_003621260.1| Polypyrimidine tract-binding protein-like protein [Medicago
           truncatula] gi|355496275|gb|AES77478.1| Polypyrimidine
           tract-binding protein-like protein [Medicago truncatula]
          Length = 618

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/51 (82%), Positives = 45/51 (88%), Gaps = 1/51 (1%)
 Frame = -2

Query: 203 LIQFTDAEIASSAREALDW-SIPRYFLLEHVGSCHLRISYSAHTDLNIKFQ 54
           LIQFTDAE A+SAR+ALD  SIPRY L EHVGSC+LRISYSAH DLNIKFQ
Sbjct: 421 LIQFTDAETAASARDALDGRSIPRYLLPEHVGSCNLRISYSAHRDLNIKFQ 471


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