BLASTX nr result

ID: Atractylodes21_contig00039439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039439
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529293.1| ring finger protein, putative [Ricinus commu...   149   3e-34
ref|XP_002865424.1| hypothetical protein ARALYDRAFT_494656 [Arab...   140   1e-31
ref|NP_199155.1| RING-H2 finger protein ATL16 [Arabidopsis thali...   139   2e-31
ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
ref|XP_004134414.1| PREDICTED: RING-H2 finger protein ATL16-like...   136   2e-30

>ref|XP_002529293.1| ring finger protein, putative [Ricinus communis]
           gi|223531217|gb|EEF33062.1| ring finger protein,
           putative [Ricinus communis]
          Length = 376

 Score =  149 bits (376), Expect = 3e-34
 Identities = 92/199 (46%), Positives = 117/199 (58%), Gaps = 22/199 (11%)
 Frame = +1

Query: 1   RIDILRRFSLSRNRNDXXXXXXXXXXXXXXXRGLHESVIRSIPIFQFQKHKDS--DCAG- 171
           RIDILRRFSLSRNRN                RGL ESVIRSIPIF+F+K  +   D  G 
Sbjct: 71  RIDILRRFSLSRNRNQEDPLMGYSPAMEN--RGLDESVIRSIPIFKFKKEGNGSGDIGGR 128

Query: 172 ---ECAVCLAEFQHDEKLRMIPNCAHVFHIDCIDVWLQNNPNCPLCRNSISISIQTHFPV 342
              ECAVCL EFQ +EKLR+IPNC+HVFHIDCIDVWLQNN NCPLCRNSIS + ++   +
Sbjct: 129 TLSECAVCLNEFQENEKLRIIPNCSHVFHIDCIDVWLQNNANCPLCRNSISSTTRS---I 185

Query: 343 PDRQLVPPPA------------VEVEEDYVVIEFGDGG----GRSTCVGERRNVAGEDDR 474
           P  +++ P +            +  +EDYVVIE G+        S    ++  +A ++  
Sbjct: 186 PFDRIIAPSSSPQDPNPYSESLIGGDEDYVVIELGNINNNIINNSHNPADQTLLAAQERL 245

Query: 475 SNSGEPIAIKKMGKKSREK 531
            NSGE    + +   SR +
Sbjct: 246 MNSGELSIARPISPSSRRQ 264


>ref|XP_002865424.1| hypothetical protein ARALYDRAFT_494656 [Arabidopsis lyrata subsp.
           lyrata] gi|297311259|gb|EFH41683.1| hypothetical protein
           ARALYDRAFT_494656 [Arabidopsis lyrata subsp. lyrata]
          Length = 379

 Score =  140 bits (354), Expect = 1e-31
 Identities = 85/186 (45%), Positives = 102/186 (54%), Gaps = 24/186 (12%)
 Frame = +1

Query: 1   RIDILRRFSLSRNRNDXXXXXXXXXXXXXXXRGLHESVIRSIPIFQFQKHKDSD------ 162
           RIDIL RFSLSR R +               RGL ESVIR+IPIF+F+K  D +      
Sbjct: 67  RIDILHRFSLSRRRRNDQDPLMVYSPELRN-RGLDESVIRAIPIFKFKKRNDQNDGVFTG 125

Query: 163 ------CAGECAVCLAEFQHDEKLRMIPNCAHVFHIDCIDVWLQNNPNCPLCRNSISISI 324
                  + EC+VCL+EFQ +EKLR+IPNC H+FHIDCIDVWLQNN NCPLCR    +S 
Sbjct: 126 EGEEEKSSQECSVCLSEFQDEEKLRIIPNCCHLFHIDCIDVWLQNNANCPLCR--ARVSC 183

Query: 325 QTHFPVPDRQLVPPPA------------VEVEEDYVVIEFGDGGGRSTCVGERRNVAGED 468
            T FP PDR   P  +            V  E +YVVIE G+  G          +  E 
Sbjct: 184 DTSFP-PDRVSAPSSSPENPIVGSGTVVVRGENEYVVIELGNSTGSDRDSPRSGKLLMEQ 242

Query: 469 DRSNSG 486
           +RS SG
Sbjct: 243 ERSKSG 248


>ref|NP_199155.1| RING-H2 finger protein ATL16 [Arabidopsis thaliana]
           gi|68565310|sp|Q9LSW9.1|ATL16_ARATH RecName:
           Full=RING-H2 finger protein ATL16
           gi|8843895|dbj|BAA97421.1| unnamed protein product
           [Arabidopsis thaliana] gi|30725342|gb|AAP37693.1|
           At5g43420 [Arabidopsis thaliana]
           gi|110736470|dbj|BAF00203.1| hypothetical protein
           [Arabidopsis thaliana] gi|332007576|gb|AED94959.1|
           RING-H2 finger protein ATL16 [Arabidopsis thaliana]
          Length = 375

 Score =  139 bits (351), Expect = 2e-31
 Identities = 85/182 (46%), Positives = 102/182 (56%), Gaps = 20/182 (10%)
 Frame = +1

Query: 1   RIDILRRFSLSRNRNDXXXXXXXXXXXXXXXRGLHESVIRSIPIFQFQKHKDSDC----- 165
           RIDIL RFSLSR R +               RGL ESVIR+IPIF+F+K  D +      
Sbjct: 67  RIDILGRFSLSRRRRNDQDPLMVYSPELRS-RGLDESVIRAIPIFKFKKRYDQNDGVFTG 125

Query: 166 ---------AGECAVCLAEFQHDEKLRMIPNCAHVFHIDCIDVWLQNNPNCPLCRNSISI 318
                    + EC+VCL+EFQ +EKLR+IPNC+H+FHIDCIDVWLQNN NCPLCR    +
Sbjct: 126 EGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRT--RV 183

Query: 319 SIQTHFPVPDRQLVPPPAVE------VEEDYVVIEFGDGGGRSTCVGERRNVAGEDDRSN 480
           S  T FP PDR   P  + E       E +YVVIE G   G          +    +RSN
Sbjct: 184 SCDTSFP-PDRVSAPSTSPENLVMLRGENEYVVIELGSSIGSDRDSPRHGRLLTGQERSN 242

Query: 481 SG 486
           SG
Sbjct: 243 SG 244


>ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|222863675|gb|EEF00806.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  138 bits (348), Expect = 5e-31
 Identities = 89/182 (48%), Positives = 105/182 (57%), Gaps = 19/182 (10%)
 Frame = +1

Query: 1   RIDILRRFSLSRNRNDXXXXXXXXXXXXXXXRGLHESVIRSIPIFQFQKHKD-------- 156
           RID+LRRFSLSRNRN                RGL ESVIRSIP+F+F+K  +        
Sbjct: 55  RIDLLRRFSLSRNRNHEDPLMAYSPSAIES-RGLDESVIRSIPVFKFKKEGNNVRNVGER 113

Query: 157 SDCAGECAVCLAEFQHDEKLRMIPNCAHVFHIDCIDVWLQNNPNCPLCRNSISISIQTHF 336
           S C  ECAVCL EFQ  EKLR IPNC+HVFHIDCIDVWLQ+N NCPLCR SIS +  T F
Sbjct: 114 SFC--ECAVCLNEFQEAEKLRRIPNCSHVFHIDCIDVWLQSNANCPLCRTSISST--TRF 169

Query: 337 PVPDRQLVP--------PPAVEV---EEDYVVIEFGDGGGRSTCVGERRNVAGEDDRSNS 483
           P+ D  + P        P +  V   +EDYVVIE  +           + +    +R NS
Sbjct: 170 PI-DHIIAPSSTPHDANPYSESVMGGDEDYVVIELSNHNSTD------QTLLAAQERLNS 222

Query: 484 GE 489
           GE
Sbjct: 223 GE 224


>ref|XP_004134414.1| PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus]
           gi|449525934|ref|XP_004169971.1| PREDICTED: LOW QUALITY
           PROTEIN: RING-H2 finger protein ATL16-like [Cucumis
           sativus]
          Length = 322

 Score =  136 bits (343), Expect = 2e-30
 Identities = 83/181 (45%), Positives = 105/181 (58%), Gaps = 8/181 (4%)
 Frame = +1

Query: 1   RIDILRRFSLSRNRNDXXXXXXXXXXXXXXXRGLHESVIRSIPIFQFQK----HKDSDCA 168
           R D++RR S S  R                 RGL ESVIRSIP+  + K    HK S   
Sbjct: 59  RFDLIRRLSPSSTR---PLPSPTAYSPALHTRGLDESVIRSIPLLHYNKSMPNHKTSS-- 113

Query: 169 GECAVCLAEFQHDEKLRMIPNCAHVFHIDCIDVWLQNNPNCPLCRNSISISIQTH-FPVP 345
            ECAVCL+EFQ  E +R+IP C+H+FHIDCID+WLQNNPNCPLCR +IS S+  H FP+P
Sbjct: 114 -ECAVCLSEFQEHETVRIIPICSHLFHIDCIDIWLQNNPNCPLCRTTISSSLLFHPFPLP 172

Query: 346 DRQLVPPPAVEVEEDYVVIEFGDGGGRSTCVGERRNVAGE--DDRSNSGEPIAIK-KMGK 516
                 P A   E D++VIE G         G R + +G+   +R+NS E  A+K + GK
Sbjct: 173 SSSPEDPIAAATERDFLVIELG---------GIRNHPSGQFSQERANSRELPAVKLEQGK 223

Query: 517 K 519
           K
Sbjct: 224 K 224


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