BLASTX nr result

ID: Atractylodes21_contig00039438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039438
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532367.1| ring finger protein, putative [Ricinus commu...    74   2e-11
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...    73   3e-11
emb|CBI23610.3| unnamed protein product [Vitis vinifera]               73   3e-11
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]    73   3e-11
ref|XP_002529293.1| ring finger protein, putative [Ricinus commu...    72   5e-11

>ref|XP_002532367.1| ring finger protein, putative [Ricinus communis]
           gi|223527923|gb|EEF30010.1| ring finger protein,
           putative [Ricinus communis]
          Length = 345

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 41/57 (71%), Positives = 45/57 (78%)
 Frame = -2

Query: 263 DECIDVHRRKDDDQFSIQPIRRSFSMDSASDRQLYLAVQEIIQRNTMNHVDAIEASE 93
           DECIDV  R+ DDQFSIQPIRRSFS+DSA DRQLYL+VQ IIQ+NT  H   I  SE
Sbjct: 267 DECIDV--REKDDQFSIQPIRRSFSLDSAVDRQLYLSVQNIIQQNT--HQRGIYTSE 319


>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/87 (51%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
 Frame = -2

Query: 263 DECIDVHRRKDDDQFSIQPIRRSFSMDSASDRQLYLAVQEIIQRNTMNHVDAIEASE--X 90
           DECID   R  DDQFSIQPIRRSFSMDS++DRQLYLA+QEI+Q+N    V     SE   
Sbjct: 277 DECIDT--RGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQN--RPVSDFSPSEGCS 332

Query: 89  XXXXXXXXXXXXXGHARSAVLPLHLNP 9
                          +RSAVLP+ ++P
Sbjct: 333 SRFRRSFFSFGHGRGSRSAVLPIPMDP 359


>emb|CBI23610.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/87 (51%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
 Frame = -2

Query: 263 DECIDVHRRKDDDQFSIQPIRRSFSMDSASDRQLYLAVQEIIQRNTMNHVDAIEASE--X 90
           DECID   R  DDQFSIQPIRRSFSMDS++DRQLYLA+QEI+Q+N    V     SE   
Sbjct: 112 DECIDT--RGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQN--RPVSDFSPSEGCS 167

Query: 89  XXXXXXXXXXXXXGHARSAVLPLHLNP 9
                          +RSAVLP+ ++P
Sbjct: 168 SRFRRSFFSFGHGRGSRSAVLPIPMDP 194


>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/87 (51%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
 Frame = -2

Query: 263 DECIDVHRRKDDDQFSIQPIRRSFSMDSASDRQLYLAVQEIIQRNTMNHVDAIEASE--X 90
           DECID   R  DDQFSIQPIRRSFSMDS++DRQLYLA+QEI+Q+N    V     SE   
Sbjct: 337 DECIDT--RGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQN--RPVSDFSPSEGCS 392

Query: 89  XXXXXXXXXXXXXGHARSAVLPLHLNP 9
                          +RSAVLP+ ++P
Sbjct: 393 SRFRRSFFSFGHGRGSRSAVLPIPMDP 419


>ref|XP_002529293.1| ring finger protein, putative [Ricinus communis]
           gi|223531217|gb|EEF33062.1| ring finger protein,
           putative [Ricinus communis]
          Length = 376

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
 Frame = -2

Query: 263 DECIDVHRRKDDDQFSIQPIRRSFSMDSASDRQLYLAVQEIIQRNTMNHVD----AIEAS 96
           DECID+  R  DDQF+IQPIRRSFSMDS++DRQLYL++QEII ++    +D     IE  
Sbjct: 290 DECIDI--RGKDDQFAIQPIRRSFSMDSSADRQLYLSIQEIILQSRQQPIDHQVSPIEGC 347

Query: 95  EXXXXXXXXXXXXXXGHARSAVLPLHLNP 9
                            +R++VLP+ L P
Sbjct: 348 SNGRPRRTFFSFGHGRGSRNSVLPVFLEP 376


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