BLASTX nr result

ID: Atractylodes21_contig00039345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039345
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group]         75   4e-12
ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chlorop...    75   4e-12
gb|AFK33906.1| unknown [Medicago truncatula]                           74   2e-11
ref|XP_003594656.1| hypothetical protein MTR_2g033020 [Medicago ...    74   2e-11
sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, ch...    72   4e-11

>gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group]
          Length = 415

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/44 (77%), Positives = 42/44 (95%)
 Frame = -2

Query: 309 MARADMLRFQPESELTLNSDGMLGPLTAELPADGLDFSQIPPSE 178
           MARADMLRFQPES LTLNS+G+LGPLT++LPA+GLD S+IPP++
Sbjct: 371 MARADMLRFQPESGLTLNSEGILGPLTSDLPAEGLDLSEIPPAD 414


>ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chloroplastic [Vitis vinifera]
           gi|296083203|emb|CBI22839.3| unnamed protein product
           [Vitis vinifera]
          Length = 410

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 34/44 (77%), Positives = 41/44 (93%)
 Frame = -2

Query: 309 MARADMLRFQPESELTLNSDGMLGPLTAELPADGLDFSQIPPSE 178
           MARADMLRFQPES LTLNSDG+LGP++A+LPA+GLD S +PP+E
Sbjct: 365 MARADMLRFQPESGLTLNSDGILGPVSADLPAEGLDLSDVPPAE 408


>gb|AFK33906.1| unknown [Medicago truncatula]
          Length = 409

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = -2

Query: 309 MARADMLRFQPESELTLNSDGMLGPLTAELPADGLDFSQIPPSESE 172
           MARADMLRFQPES LTL+SDG+LGPL ++LP +GLD S+IPP+E E
Sbjct: 363 MARADMLRFQPESGLTLSSDGILGPLGSDLPPEGLDLSEIPPAEEE 408


>ref|XP_003594656.1| hypothetical protein MTR_2g033020 [Medicago truncatula]
           gi|355483704|gb|AES64907.1| hypothetical protein
           MTR_2g033020 [Medicago truncatula]
          Length = 407

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = -2

Query: 309 MARADMLRFQPESELTLNSDGMLGPLTAELPADGLDFSQIPPSESE 172
           MARADMLRFQPES LTL+SDG+LGPL ++LP +GLD S+IPP+E E
Sbjct: 361 MARADMLRFQPESGLTLSSDGILGPLGSDLPPEGLDLSEIPPAEEE 406


>sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, chloroplastic; AltName:
           Full=CS1; Flags: Precursor gi|18060|emb|CAA46927.1|
           ribosomal protein S1 [Spinacia oleracea]
           gi|170143|gb|AAA34045.1| chloroplast ribosomal protein
           S1 [Spinacia oleracea]
          Length = 411

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/43 (76%), Positives = 40/43 (93%)
 Frame = -2

Query: 309 MARADMLRFQPESELTLNSDGMLGPLTAELPADGLDFSQIPPS 181
           MARADMLRFQPES LTL+SDG+LGPLT++LPA+GLD S +PP+
Sbjct: 366 MARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSVVPPA 408


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