BLASTX nr result

ID: Atractylodes21_contig00039298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039298
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75186.1| hypothetical protein VITISV_001913 [Vitis vinifera]   207   8e-52
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...   180   1e-43
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...   176   2e-42
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...   171   8e-41
emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]   170   1e-40

>emb|CAN75186.1| hypothetical protein VITISV_001913 [Vitis vinifera]
          Length = 746

 Score =  207 bits (527), Expect = 8e-52
 Identities = 92/134 (68%), Positives = 115/134 (85%)
 Frame = -1

Query: 406 ICPLAKQKRLPFVSLNNISDKPYDVVHCDVWGPYHVDSYQGHRFFVTIVDDCTRFTCVYL 227
           ICPLAKQ+R  F S N++S  P+D+VHCD+WGPY V S+  HR+F+T+ DDC+RFT ++L
Sbjct: 106 ICPLAKQRRFSFDSHNHMSQFPFDLVHCDIWGPYSVSSHARHRYFLTLGDDCSRFTWIFL 165

Query: 226 LKQKSEVQFLIPRFFDMILTQFDAKIKIFRSDNAKELLFTDFFRTRGILHHFSCVERPQQ 47
           LKQKS+V  +IP+FF+M++TQF+AKIK+FRSDNA EL FTDFF  RG+LH FSCVERPQQ
Sbjct: 166 LKQKSDVGTIIPKFFNMVVTQFNAKIKVFRSDNAPELAFTDFFNDRGVLHQFSCVERPQQ 225

Query: 46  NSVVERKHQHLLNV 5
           NS+VERKHQHLLNV
Sbjct: 226 NSIVERKHQHLLNV 239


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
           score: 11.19) [Arabidopsis thaliana]
          Length = 1633

 Score =  180 bits (457), Expect = 1e-43
 Identities = 80/136 (58%), Positives = 105/136 (77%)
 Frame = -1

Query: 409 KICPLAKQKRLPFVSLNNISDKPYDVVHCDVWGPYHVDSYQGHRFFVTIVDDCTRFTCVY 230
           +I PLAKQKRL +VS NN++  P+D++H D+WGP+ ++S  G R+F+T+VDDCTR T VY
Sbjct: 533 RISPLAKQKRLAYVSHNNLASSPFDLIHLDIWGPFSIESVDGFRYFLTLVDDCTRTTWVY 592

Query: 229 LLKQKSEVQFLIPRFFDMILTQFDAKIKIFRSDNAKELLFTDFFRTRGILHHFSCVERPQ 50
           ++K KSEV  + P F  +I TQ++AKIK  RSDN KEL FT F + +G++H FSC   PQ
Sbjct: 593 MMKNKSEVSNIFPVFVKLIFTQYNAKIKAIRSDNVKELAFTKFVKEQGMIHQFSCAYTPQ 652

Query: 49  QNSVVERKHQHLLNVA 2
           QNSVVERKHQHLLN+A
Sbjct: 653 QNSVVERKHQHLLNIA 668


>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score =  176 bits (446), Expect = 2e-42
 Identities = 82/135 (60%), Positives = 100/135 (74%)
 Frame = -1

Query: 406  ICPLAKQKRLPFVSLNNISDKPYDVVHCDVWGPYHVDSYQGHRFFVTIVDDCTRFTCVYL 227
            ICPLAKQ+RL F  LNNI++  +D++HCD+WGP+   ++ GH +F TIVDD +R+T VYL
Sbjct: 1830 ICPLAKQRRLSFPILNNIAENIFDLIHCDIWGPFKTPTHAGHSYFATIVDDKSRYTWVYL 1889

Query: 226  LKQKSEVQFLIPRFFDMILTQFDAKIKIFRSDNAKELLFTDFFRTRGILHHFSCVERPQQ 47
            LK KS++  +IPRFF +I TQF   IK+FRSDNA EL F D F   G  H FSC   PQQ
Sbjct: 1890 LKHKSDILQVIPRFFKLIETQFSKVIKVFRSDNAPELNFRDLFAKTGTTHQFSCAYTPQQ 1949

Query: 46   NSVVERKHQHLLNVA 2
            NSVVERKHQHLLN A
Sbjct: 1950 NSVVERKHQHLLNEA 1964



 Score =  174 bits (441), Expect = 7e-42
 Identities = 81/135 (60%), Positives = 100/135 (74%)
 Frame = -1

Query: 406 ICPLAKQKRLPFVSLNNISDKPYDVVHCDVWGPYHVDSYQGHRFFVTIVDDCTRFTCVYL 227
           ICPLAKQ+RL F  LNNI++  ++++HCD+WGP+   ++ GH +  TIVDD +R+T VYL
Sbjct: 405 ICPLAKQRRLSFPILNNIAENVFELIHCDIWGPFKTPTHAGHSYSATIVDDKSRYTWVYL 464

Query: 226 LKQKSEVQFLIPRFFDMILTQFDAKIKIFRSDNAKELLFTDFFRTRGILHHFSCVERPQQ 47
           LK KS++  +IPRFF +I TQF   IK+FRSDNA EL F D F   G  H FSC   PQQ
Sbjct: 465 LKHKSDILQVIPRFFKLIETQFSKVIKVFRSDNAPELNFRDLFAKTGTTHQFSCAYTPQQ 524

Query: 46  NSVVERKHQHLLNVA 2
           NSVVERKHQHLLNVA
Sbjct: 525 NSVVERKHQHLLNVA 539


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
            gi|7268152|emb|CAB78488.1| retrovirus-related like
            polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score =  171 bits (432), Expect = 8e-41
 Identities = 75/132 (56%), Positives = 100/132 (75%)
 Frame = -1

Query: 397  LAKQKRLPFVSLNNISDKPYDVVHCDVWGPYHVDSYQGHRFFVTIVDDCTRFTCVYLLKQ 218
            L K KRL ++S NN++  P+D+VH D+WGP+ ++S +G R+F+T+VDDCTR T VY+L+ 
Sbjct: 614  LQKLKRLAYISHNNLASNPFDLVHLDIWGPFSIESIEGFRYFLTVVDDCTRTTWVYMLRN 673

Query: 217  KSEVQFLIPRFFDMILTQFDAKIKIFRSDNAKELLFTDFFRTRGILHHFSCVERPQQNSV 38
            K +V  + P F  ++ TQF+AKIK  RSDNA EL FT+  +  G+LHHFSC   PQQNSV
Sbjct: 674  KKDVSSVFPEFIKLVSTQFNAKIKAIRSDNAPELGFTEIVKEHGMLHHFSCAYTPQQNSV 733

Query: 37   VERKHQHLLNVA 2
            VERKHQH+LNVA
Sbjct: 734  VERKHQHILNVA 745


>emb|CAN65540.1| hypothetical protein VITISV_029946 [Vitis vinifera]
          Length = 1240

 Score =  170 bits (430), Expect = 1e-40
 Identities = 76/128 (59%), Positives = 98/128 (76%)
 Frame = -1

Query: 385 KRLPFVSLNNISDKPYDVVHCDVWGPYHVDSYQGHRFFVTIVDDCTRFTCVYLLKQKSEV 206
           KRLPF   NN+S  P+D++HCD+WGP+H+ ++ G R+F+TIVDDCTR T V+LL+ KS+V
Sbjct: 413 KRLPFDCHNNLSPSPFDLIHCDIWGPFHIPTHDGFRYFLTIVDDCTRNTWVHLLRAKSDV 472

Query: 205 QFLIPRFFDMILTQFDAKIKIFRSDNAKELLFTDFFRTRGILHHFSCVERPQQNSVVERK 26
           + + P+FF M+ TQF   IK  RSDNA  L  ++ F   G+LH FSCVE PQQNSVVERK
Sbjct: 473 KTIFPQFFSMVKTQFGLTIKXVRSDNAPXLNLSNLFTQLGVLHFFSCVETPQQNSVVERK 532

Query: 25  HQHLLNVA 2
           HQH+LNVA
Sbjct: 533 HQHILNVA 540


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