BLASTX nr result

ID: Atractylodes21_contig00039226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039226
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521133.1| pentatricopeptide repeat-containing protein,...   137   9e-31
ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containi...   130   1e-28
emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]   130   1e-28
ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27

>ref|XP_002521133.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539702|gb|EEF41284.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 274

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/87 (74%), Positives = 76/87 (87%)
 Frame = -2

Query: 262 SWNSMISGYAQNGFFMEALELFREMQMDDNAAMPNYITLISVLPAISRLGALEIGKWVHF 83
           SWN MISGYAQNG+F EA+ELF +MQMDD +  PNY+TL+SVLPAISRLGALE+GKWVH 
Sbjct: 126 SWNVMISGYAQNGYFKEAIELFHDMQMDDMS--PNYVTLVSVLPAISRLGALELGKWVHL 183

Query: 82  FAVKNGMNIDPVLGSALIDMYSKCGSI 2
           +A KN + ++ VLGSALIDMYSKCGSI
Sbjct: 184 YAEKNNIEVNDVLGSALIDMYSKCGSI 210


>ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/87 (70%), Positives = 75/87 (86%)
 Frame = -2

Query: 262 SWNSMISGYAQNGFFMEALELFREMQMDDNAAMPNYITLISVLPAISRLGALEIGKWVHF 83
           SWN MI+GYAQ+G F EA+E+FREMQM +    PNY+TL+SVLPA+SRLGALE+GKWVH 
Sbjct: 226 SWNVMIAGYAQSGHFKEAVEVFREMQMAE--VPPNYVTLVSVLPAMSRLGALELGKWVHL 283

Query: 82  FAVKNGMNIDPVLGSALIDMYSKCGSI 2
           +AV+N + +D VLGSALIDMY+KCGSI
Sbjct: 284 YAVRNNIGVDDVLGSALIDMYAKCGSI 310


>emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
          Length = 613

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/87 (70%), Positives = 75/87 (86%)
 Frame = -2

Query: 262 SWNSMISGYAQNGFFMEALELFREMQMDDNAAMPNYITLISVLPAISRLGALEIGKWVHF 83
           SWN MI+GYAQ+G F EA+E+FREMQM +    PNY+TL+SVLPA+SRLGALE+GKWVH 
Sbjct: 203 SWNVMIAGYAQSGHFKEAVEVFREMQMAE--VPPNYVTLVSVLPAMSRLGALELGKWVHL 260

Query: 82  FAVKNGMNIDPVLGSALIDMYSKCGSI 2
           +AV+N + +D VLGSALIDMY+KCGSI
Sbjct: 261 YAVRNNIGVDDVLGSALIDMYAKCGSI 287


>ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|222861374|gb|EEE98916.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score =  129 bits (323), Expect = 3e-28
 Identities = 62/87 (71%), Positives = 72/87 (82%)
 Frame = -2

Query: 262 SWNSMISGYAQNGFFMEALELFREMQMDDNAAMPNYITLISVLPAISRLGALEIGKWVHF 83
           SWN MISG AQNG F EA+E+F +MQ+ D    PNY+TL+SVLPA+SRLGA+E+GKWVH 
Sbjct: 223 SWNVMISGCAQNGHFKEAIEMFHDMQLGD--VPPNYVTLVSVLPAVSRLGAIELGKWVHL 280

Query: 82  FAVKNGMNIDPVLGSALIDMYSKCGSI 2
           FA KN + ID VLGSALIDMYSKCGSI
Sbjct: 281 FAEKNEIEIDDVLGSALIDMYSKCGSI 307


>ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/87 (68%), Positives = 73/87 (83%)
 Frame = -2

Query: 262 SWNSMISGYAQNGFFMEALELFREMQMDDNAAMPNYITLISVLPAISRLGALEIGKWVHF 83
           SWN MISGYAQNG F+EA+ LF+EMQ  +    PNY+TL+SVLPAI+R+GALE+GKW+H 
Sbjct: 237 SWNVMISGYAQNGHFIEAINLFQEMQSSN--IDPNYVTLVSVLPAIARIGALELGKWIHL 294

Query: 82  FAVKNGMNIDPVLGSALIDMYSKCGSI 2
           +A KN + ID VLGSAL+DMYSKCGSI
Sbjct: 295 YAGKNKVEIDDVLGSALVDMYSKCGSI 321


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