BLASTX nr result

ID: Atractylodes21_contig00039164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039164
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68680.1| hypothetical protein VITISV_041943 [Vitis vinifera]    92   4e-17
ref|XP_003596984.1| Rhomboid family member [Medicago truncatula]...    75   8e-12

>emb|CAN68680.1| hypothetical protein VITISV_041943 [Vitis vinifera]
          Length = 124

 Score = 92.4 bits (228), Expect = 4e-17
 Identities = 62/146 (42%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
 Frame = -2

Query: 513 MNRRIR---RRSSATD-GYLRYLKPGALAKLRDSKINARTHLRSSDSQISLYXXXXXXXX 346
           MNRRIR   R SS  D  + RYLKPGALA+LRDS+I+AR+H   S SQI L+        
Sbjct: 1   MNRRIRXLHRSSSKRDEAFHRYLKPGALAQLRDSRISARSHRVDSHSQIHLHRTSSPPSS 60

Query: 345 XXXXXXPNXXXXXXXXXXXXXXXXXANDGGSPCFSMRFYGPRCPQRKKLMAARSMFFLNP 166
                                          PCF+ R YGPRC QRKKL+AA+S+F  + 
Sbjct: 61  PLPPQID----------------------AFPCFAGRNYGPRCLQRKKLVAAKSVFLKSS 98

Query: 165 NPNSPTSDGPEP-VIDAFTNDFLVAH 91
           +P SP S+ P+  V+D F  + LVAH
Sbjct: 99  SPASPMSESPDSVVVDLFGPEILVAH 124


>ref|XP_003596984.1| Rhomboid family member [Medicago truncatula]
           gi|355486032|gb|AES67235.1| Rhomboid family member
           [Medicago truncatula]
          Length = 221

 Score = 74.7 bits (182), Expect = 8e-12
 Identities = 49/134 (36%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = -2

Query: 498 RRRSSATDGYLRYLKPGALAKLRDSKINARTHLRSSDSQISLYXXXXXXXXXXXXXXPNX 319
           R R +  + + ++LKPG LA+LRDSKI AR+H  +S SQIS+Y              P  
Sbjct: 4   RTRPTLPNHFHKFLKPGTLARLRDSKITARSHRLNSLSQISIYRPPASPPPPPPSDQPQT 63

Query: 318 XXXXXXXXXXXXXXXXANDGGSPCFSMRFYGPRCPQRKKLMAARSMFFLNPNPNSP-TSD 142
                            +  G P F    YGPRCPQRKKL+AA+S+FF+   P SP  +D
Sbjct: 64  TAV--------------SADGFPSFFSGIYGPRCPQRKKLVAAKSVFFV---PGSPAAAD 106

Query: 141 GPEPVIDAFTNDFL 100
             +  +++F  D +
Sbjct: 107 SADLGLESFGGDII 120


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