BLASTX nr result

ID: Atractylodes21_contig00039153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039153
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635094.1| PREDICTED: uncharacterized protein LOC100853...    62   4e-08
ref|XP_002527227.1| conserved hypothetical protein [Ricinus comm...    61   8e-08

>ref|XP_003635094.1| PREDICTED: uncharacterized protein LOC100853951 [Vitis vinifera]
           gi|297736690|emb|CBI25707.3| unnamed protein product
           [Vitis vinifera]
          Length = 105

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
 Frame = +3

Query: 132 PSSVSDH--EDFTQI---NSGVPRSRKWRKLMKKLVQQSKKSIYGSSKPSIFRYDAVSYS 296
           PSS   H  ED++++   + G  RS++ R ++K+++++ K SIYGS KP  F+YDAVSYS
Sbjct: 19  PSSPCFHGPEDYSRLRICSRGRNRSQRLRNIIKRIMREGK-SIYGS-KPLTFQYDAVSYS 76

Query: 297 LNFDEGNHSNEYYLNGSRCSQVL 365
            NFD+G H  EY      CSQVL
Sbjct: 77  QNFDDGCHKEEY----GHCSQVL 95


>ref|XP_002527227.1| conserved hypothetical protein [Ricinus communis]
           gi|223533403|gb|EEF35153.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 115

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 11/88 (12%)
 Frame = +3

Query: 99  SSHSSDSECTSPSS--VSDHEDFTQINSGVPRS------RKWRKLMKKLVQQSKKSIYGS 254
           SS  S    +SPS   V D  ++++I+S    S      R+WR  +++LV+  K S+YGS
Sbjct: 9   SSCLSGCMISSPSCFPVHDEMEYSRIHSSSGNSSNKRSTRRWRHFIRRLVRDGKSSLYGS 68

Query: 255 S---KPSIFRYDAVSYSLNFDEGNHSNE 329
           S   KP  F YDAVSYS NFDEG H  +
Sbjct: 69  SSSPKPLSFHYDAVSYSQNFDEGCHHED 96


Top