BLASTX nr result
ID: Atractylodes21_contig00039148
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00039148
(602 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACB28472.1| polyprotein [Ananas comosus] 57 1e-20
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri] 64 3e-17
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 55 1e-16
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ... 54 5e-16
dbj|BAB02140.1| unnamed protein product [Arabidopsis thaliana] 48 1e-13
>gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 57.4 bits (137), Expect(3) = 1e-20
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -1
Query: 356 LHILIDSRSTHNFLDVVLAKKLGCSLEAISPQTITVADGNHLL 228
+HILIDS STHNFLD +A KLGC E I +TVADGN L+
Sbjct: 23 IHILIDSGSTHNFLDAAVAAKLGCCAENIPAVNVTVADGNKLI 65
Score = 53.1 bits (126), Expect(3) = 1e-20
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = -2
Query: 214 CKDFIWEMQGRMFKADVMLISLGSCDMVLGVQWLS*LG 101
C+ F W+MQG FKA+++L+ L CDMVLGVQWL LG
Sbjct: 70 CRAFKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLG 107
Score = 34.7 bits (78), Expect(3) = 1e-20
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = -3
Query: 111 VSW--ELGLICWDFKKL*MEFKWAGKQLTLTG 22
V W +LG I WDF KL MEF++ G+++ L G
Sbjct: 100 VQWLKQLGPILWDFSKLRMEFQFQGQKIVLRG 131
>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
Length = 1557
Score = 63.5 bits (153), Expect(3) = 3e-17
Identities = 43/142 (30%), Positives = 60/142 (42%), Gaps = 26/142 (18%)
Frame = -1
Query: 587 KPTKNFRYIPADVRAEKIGKGLCYYCDLPYDRLHKCQFKEPQLFTVEI------------ 444
KPT+ F Y D E+ KGLC +CD PY H + ++ Q+F +E
Sbjct: 384 KPTRKFTY---DEMQERRTKGLCMFCDEPYTPGHHLKHRKSQIFVMECEEDDLDDEQEVN 440
Query: 443 -----------PGREGENCSMXXXXXXXXXXXXPCI--FGK-PLHILIDSRSTHNFLDVV 306
P E S + +GK LHI +D STHNF+D+
Sbjct: 441 ATVEEEDAVVNPNEEQPTISANALNGSTTFNCMRLMGQYGKHKLHIFVDPGSTHNFIDIK 500
Query: 305 LAKKLGCSLEAISPQTITVADG 240
+AK++ C LE P T+ A G
Sbjct: 501 VAKEINCKLEGTRPMTVDAALG 522
Score = 44.3 bits (103), Expect(3) = 3e-17
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = -2
Query: 223 MYICKDFIWEMQGRMFKADVMLISLGSCDMVLGVQWLS*LG 101
++ KDF W MQG F +V + L D+VLGVQWL+ LG
Sbjct: 528 LFRSKDFTWRMQGYSFTTEVRTLPLDHWDIVLGVQWLATLG 568
Score = 25.8 bits (55), Expect(3) = 3e-17
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -3
Query: 111 VSW--ELGLICWDFKKL*MEFKWAGKQLTLTG 22
V W LG I WDF L MEF G + L G
Sbjct: 561 VQWLATLGPILWDFTYLRMEFTLNGAKYILRG 592
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 55.1 bits (131), Expect(3) = 1e-16
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 17/122 (13%)
Frame = -1
Query: 545 AEKIGKGLCYYCDLPYDRLHKCQFKEPQLFTVEIPGR--EGENCSMXXXXXXXXXXXXPC 372
+++ KGLCY+CD Y H K+ QLF +++ + +
Sbjct: 321 SDRRSKGLCYFCDEKYTPEHYLVHKKTQLFRMDVDEEFEDAREELVNDDDEHMPQISVNA 380
Query: 371 IFG---------------KPLHILIDSRSTHNFLDVVLAKKLGCSLEAISPQTITVADGN 237
+ G K + ILIDS STHNFLD A KLGC ++ ++VADG
Sbjct: 381 VSGIAGYKTMRVKGTYDKKIIFILIDSGSTHNFLDPNTAAKLGCKVDTAGLTRVSVADGR 440
Query: 236 HL 231
L
Sbjct: 441 KL 442
Score = 45.8 bits (107), Expect(3) = 1e-16
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = -2
Query: 208 DFIWEMQGRMFKADVMLISLGSCDMVLGVQWLS*LG 101
DF W++Q F++D++LI L DMVLGVQWL LG
Sbjct: 450 DFSWKLQTTTFQSDILLIPLQGIDMVLGVQWLETLG 485
Score = 30.8 bits (68), Expect(3) = 1e-16
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -3
Query: 111 VSW--ELGLICWDFKKL*MEFKWAGKQLTLTGI 19
V W LG I W+FKKL M FK+ +++ L G+
Sbjct: 478 VQWLETLGRISWEFKKLEMRFKFNNQKVLLHGL 510
>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 53.5 bits (127), Expect(3) = 5e-16
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 20/119 (16%)
Frame = -1
Query: 527 GLCYYCDLPYDRLHKCQFKEPQLFTVEIPGREGENC--------------------SMXX 408
GLCY+CD + H K+ QLF +++ E E+ ++
Sbjct: 304 GLCYFCDEKFTPEHYLVHKKTQLFRMDVD-EEFEDAVEVLSDDDHEQKPMPQISVNAVSG 362
Query: 407 XXXXXXXXXXPCIFGKPLHILIDSRSTHNFLDVVLAKKLGCSLEAISPQTITVADGNHL 231
+ + L ILIDS STHNF+D +A KLGC +E+ + VADG L
Sbjct: 363 ISGYKTMGVKGTVDKRDLFILIDSGSTHNFIDSTVAAKLGCHVESAGLTKVAVADGRKL 421
Score = 46.2 bits (108), Expect(3) = 5e-16
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -2
Query: 211 KDFIWEMQGRMFKADVMLISLGSCDMVLGVQWLS*LG 101
K F W++Q F++D++LI L DMVLGVQWL LG
Sbjct: 428 KGFTWKLQSTTFQSDILLIPLQGVDMVLGVQWLETLG 464
Score = 29.6 bits (65), Expect(3) = 5e-16
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = -3
Query: 111 VSW--ELGLICWDFKKL*MEFKWAGKQLTLTGI 19
V W LG I W+FKKL M+F + +++ L GI
Sbjct: 457 VQWLETLGRISWEFKKLEMQFFYKNQRVWLHGI 489
>dbj|BAB02140.1| unnamed protein product [Arabidopsis thaliana]
Length = 904
Score = 47.8 bits (112), Expect(3) = 1e-13
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = -1
Query: 362 KPLHILIDSRSTHNFLDVVLAKKLGCSLEAISPQTITVADGNHL 231
K L ILIDS ST NF+D +AKKLGC +E ++VADG L
Sbjct: 243 KILFILIDSGSTFNFIDSTMAKKLGCKVEPTGLTRVSVADGRKL 286
Score = 44.3 bits (103), Expect(3) = 1e-13
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = -2
Query: 208 DFIWEMQGRMFKADVMLISLGSCDMVLGVQWLS*LG 101
DF W++Q F +D+++I L DMVLGVQWL+ LG
Sbjct: 294 DFTWKLQTTSFASDILMIPLQVIDMVLGVQWLATLG 329
Score = 28.9 bits (63), Expect(3) = 1e-13
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -3
Query: 111 VSW--ELGLICWDFKKL*MEFKWAGKQLTLTGI 19
V W LG I W+F+K M FK+ +++ L G+
Sbjct: 322 VQWLATLGRISWEFQKFEMRFKYKNQKILLHGL 354