BLASTX nr result
ID: Atractylodes21_contig00039128
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00039128
(308 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|2... 138 4e-31
ref|XP_002526080.1| pentatricopeptide repeat-containing protein,... 130 1e-28
ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi... 128 5e-28
emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera] 128 5e-28
ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containi... 127 7e-28
>ref|XP_002305373.1| predicted protein [Populus trichocarpa] gi|222848337|gb|EEE85884.1|
predicted protein [Populus trichocarpa]
Length = 676
Score = 138 bits (348), Expect = 4e-31
Identities = 67/101 (66%), Positives = 82/101 (81%)
Frame = -2
Query: 307 FKEMADAGVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVK 128
F +M D+GVEID A+VVSVLP C YLK L+VGR VHG+V+EK L + + V NALVDMY K
Sbjct: 211 FNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI-VSNALVDMYAK 269
Query: 127 CGEMEAARVIFDETSQRDVVTWTSMINGYIVNGDTRSALSL 5
CG M+ AR++FD +RDVV+WTSMINGYI+NGD +SALSL
Sbjct: 270 CGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSL 310
Score = 79.0 bits (193), Expect = 4e-13
Identities = 37/88 (42%), Positives = 54/88 (61%)
Frame = -2
Query: 274 DNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVKCGEMEAARVIF 95
DN T V+ C+ L ++ GR +HG+ +LFV N+L+ MY+ CGE+E AR +F
Sbjct: 121 DNYTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVF 180
Query: 94 DETSQRDVVTWTSMINGYIVNGDTRSAL 11
D ++ VV+W +MINGY NG +AL
Sbjct: 181 DAMKEKSVVSWNTMINGYFKNGFANTAL 208
Score = 65.9 bits (159), Expect = 3e-09
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = -2
Query: 307 FKEMADAGVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVK 128
FK+M GVEI+ AT S+LP L L+ ++ + G N+ V +L+D+Y K
Sbjct: 412 FKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSK 471
Query: 127 CGEMEAARVIFD--ETSQRDVVTWTSMINGYIVNGDTRSALSL 5
CG +E+A IF+ +D+ W+ +I GY ++G +A+SL
Sbjct: 472 CGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSL 514
Score = 64.3 bits (155), Expect = 1e-08
Identities = 33/101 (32%), Positives = 55/101 (54%)
Frame = -2
Query: 307 FKEMADAGVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVK 128
FK M G+ ++ T+ +L CA L LK GR +HG V ++ L + V +L+DMY K
Sbjct: 311 FKIMQIEGLRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAK 370
Query: 127 CGEMEAARVIFDETSQRDVVTWTSMINGYIVNGDTRSALSL 5
C + + +F TS++ V W ++++G + N A+ L
Sbjct: 371 CNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKLATEAIGL 411
>ref|XP_002526080.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534577|gb|EEF36274.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 502
Score = 130 bits (327), Expect = 1e-28
Identities = 60/101 (59%), Positives = 77/101 (76%)
Frame = -2
Query: 307 FKEMADAGVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVK 128
F +M D GVEID A+VVSVLP C +LK L++GR VH V++K L + RNAL+DMY K
Sbjct: 146 FNQMVDLGVEIDCASVVSVLPACGHLKELEMGRRVHATVEDKDLGNKIAARNALIDMYAK 205
Query: 127 CGEMEAARVIFDETSQRDVVTWTSMINGYIVNGDTRSALSL 5
CG M AR++FD +RDV++WTSMINGYI+NGD +SAL+L
Sbjct: 206 CGSMAEARLVFDGMDERDVISWTSMINGYILNGDEKSALTL 246
Score = 68.6 bits (166), Expect = 5e-10
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Frame = -2
Query: 307 FKEMADAGVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVK 128
FK+M VE D AT S+LP A L L + +H +K+ G L V L+D+Y K
Sbjct: 345 FKQMLLKKVEPDGATFNSLLPAYAILADLLPAKNIHCYLKKTGFLSGLEVATCLIDIYSK 404
Query: 127 CGEMEAARVIFD--ETSQRDVVTWTSMINGYIVNGDTRSALSL 5
CG +E+A IF+ RD+ W+ +I+GY ++G +A+SL
Sbjct: 405 CGSLESAHRIFNAIPIGVRDIFAWSVIISGYGMHGHGETAVSL 447
Score = 55.1 bits (131), Expect = 6e-06
Identities = 30/101 (29%), Positives = 48/101 (47%)
Frame = -2
Query: 307 FKEMADAGVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVK 128
F+ M + + T+ SVL C LK GR HG + L+ + V +L+DMY K
Sbjct: 247 FRTMQMERIIPSSVTIASVLSACINLKD---GRCFHGWTMRQNLDSEIIVETSLIDMYAK 303
Query: 127 CGEMEAARVIFDETSQRDVVTWTSMINGYIVNGDTRSALSL 5
C ++ + + TS W +M++G I N A++L
Sbjct: 304 CNRVDLSYGVLRRTSGERTAPWNAMLSGCIHNDLATEAITL 344
>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
protein product [Vitis vinifera]
Length = 676
Score = 128 bits (321), Expect = 5e-28
Identities = 62/102 (60%), Positives = 79/102 (77%)
Frame = -2
Query: 307 FKEMADAGVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVK 128
F M G+E D ATVVSVLPVC+YLK L+VGR VH +V+ K L E++ V N+L+DMY K
Sbjct: 212 FDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAK 271
Query: 127 CGEMEAARVIFDETSQRDVVTWTSMINGYIVNGDTRSALSLC 2
CG M+ A++IF E +RDVV+WT+M+NGYI+NGD RSAL LC
Sbjct: 272 CGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLC 313
Score = 74.3 bits (181), Expect = 9e-12
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = -2
Query: 274 DNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVKCGEMEAARVIF 95
DN T V+ C ++G +H G + + FV+N+L+ MY+ CGEME AR +F
Sbjct: 122 DNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVF 181
Query: 94 DETSQRDVVTWTSMINGYIVNGDTRSAL 11
D +R +V+W +MINGY NG + AL
Sbjct: 182 DLMRERTLVSWNTMINGYFKNGCVKEAL 209
Score = 73.6 bits (179), Expect = 2e-11
Identities = 37/103 (35%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Frame = -2
Query: 307 FKEMADAGVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVK 128
FK+M V+ ++AT+ S+LP A+L L+ R +HG + G + V L+D+Y K
Sbjct: 414 FKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSK 473
Query: 127 CGEMEAARVIFD--ETSQRDVVTWTSMINGYIVNGDTRSALSL 5
CG +E+A IF+ +D++TW+++I GY ++G +A+SL
Sbjct: 474 CGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISL 516
Score = 70.5 bits (171), Expect = 1e-10
Identities = 35/87 (40%), Positives = 52/87 (59%)
Frame = -2
Query: 265 TVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVKCGEMEAARVIFDET 86
T+ SVL CA L +LK GR +HG + LE + V AL+DMY KC + + +F +T
Sbjct: 327 TLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKT 386
Query: 85 SQRDVVTWTSMINGYIVNGDTRSALSL 5
S++ W ++I+G I NG +R A+ L
Sbjct: 387 SKQRTAPWNAIISGCIHNGLSRKAIEL 413
>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 128 bits (321), Expect = 5e-28
Identities = 62/102 (60%), Positives = 79/102 (77%)
Frame = -2
Query: 307 FKEMADAGVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVK 128
F M G+E D ATVVSVLPVC+YLK L+VGR VH +V+ K L E++ V N+L+DMY K
Sbjct: 212 FDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAK 271
Query: 127 CGEMEAARVIFDETSQRDVVTWTSMINGYIVNGDTRSALSLC 2
CG M+ A++IF E +RDVV+WT+M+NGYI+NGD RSAL LC
Sbjct: 272 CGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLC 313
Score = 74.3 bits (181), Expect = 9e-12
Identities = 35/88 (39%), Positives = 51/88 (57%)
Frame = -2
Query: 274 DNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVKCGEMEAARVIF 95
DN T V+ C ++G +H G + + FV+N+L+ MY+ CGEME AR +F
Sbjct: 122 DNYTYPFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVF 181
Query: 94 DETSQRDVVTWTSMINGYIVNGDTRSAL 11
D +R +V+W +MINGY NG + AL
Sbjct: 182 DLMRERTLVSWNTMINGYFKNGCVKEAL 209
Score = 73.6 bits (179), Expect = 2e-11
Identities = 37/103 (35%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Frame = -2
Query: 307 FKEMADAGVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVK 128
FK+M V+ ++AT+ S+LP A+L L+ R +HG + G + V L+D+Y K
Sbjct: 414 FKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSK 473
Query: 127 CGEMEAARVIFD--ETSQRDVVTWTSMINGYIVNGDTRSALSL 5
CG +E+A IF+ +D++TW+++I GY ++G +A+SL
Sbjct: 474 CGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISL 516
Score = 68.2 bits (165), Expect = 7e-10
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = -2
Query: 265 TVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVKCGEMEAARVIFDET 86
T+ SVL CA L +LK GR +HG + LE + V AL+DMY KC + + +F +
Sbjct: 327 TLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKX 386
Query: 85 SQRDVVTWTSMINGYIVNGDTRSALSL 5
S++ W ++I+G I NG +R A+ L
Sbjct: 387 SKQRTAPWNAIISGCIHNGLSRKAIEL 413
>ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 127 bits (320), Expect = 7e-28
Identities = 62/102 (60%), Positives = 77/102 (75%)
Frame = -2
Query: 307 FKEMADAGVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVK 128
+ M D GVE D ATVVSVLP C LK +++GREVH +V+EKG N+ VRNALVDMYVK
Sbjct: 202 YGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVK 261
Query: 127 CGEMEAARVIFDETSQRDVVTWTSMINGYIVNGDTRSALSLC 2
CG+M+ A ++ +DVVTWT++INGYI+NGD RSAL LC
Sbjct: 262 CGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLC 303
Score = 73.9 bits (180), Expect = 1e-11
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = -2
Query: 307 FKEMADAGVEI-DNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYV 131
F EM +G + D T V+ C L + VG +HG + G + + FV+N L+ MY+
Sbjct: 100 FVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYM 159
Query: 130 KCGEMEAARVIFDETSQRDVVTWTSMINGYIVNGDTRSALSL 5
GE EAA+++FD +R V++W +MINGY N A+++
Sbjct: 160 NAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNV 201
Score = 58.2 bits (139), Expect = 7e-07
Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Frame = -2
Query: 307 FKEMADAGVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVK 128
FK+M V+ D+AT S+LP A L L+ +H + G L V + LVD+Y K
Sbjct: 404 FKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSK 463
Query: 127 CGEMEAARVIFDETS--QRDVVTWTSMINGYIVNGDTRSALSL 5
CG + A IF+ S +D++ W+++I Y +G + A+ L
Sbjct: 464 CGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKL 506
Score = 55.8 bits (133), Expect = 3e-06
Identities = 27/94 (28%), Positives = 50/94 (53%)
Frame = -2
Query: 286 GVEIDNATVVSVLPVCAYLKALKVGREVHGMVKEKGLEENLFVRNALVDMYVKCGEMEAA 107
GV+ ++ ++ S+L C L L G+ +H + +E + V AL++MY KC +
Sbjct: 310 GVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLS 369
Query: 106 RVIFDETSQRDVVTWTSMINGYIVNGDTRSALSL 5
+F TS++ W ++++G+I N R A+ L
Sbjct: 370 YKVFMGTSKKRTAPWNALLSGFIQNRLAREAIEL 403