BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039120
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...    88   3e-29
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...    87   3e-29
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...    85   6e-29
emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]          90   8e-29
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...    86   2e-28

>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1050

 Score = 88.2 bits (217), Expect(2) = 3e-29
 Identities = 42/74 (56%), Positives = 56/74 (75%)
 Frame = +3

Query: 6   NDIPTLTSVKTWLRNYFSMKDLTDDAYVLGIKIYRDXXXXXXXXXHSTYINKVVNKFSME 185
           NDIP L SVKT L+N FSMKDL + AY+LGI+IYRD          STYI+KV+ +F+M+
Sbjct: 734 NDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQ 793

Query: 186 ENNKGFLPISYGIS 227
           ++ KGFLP+S+GI+
Sbjct: 794 DSKKGFLPMSHGIN 807



 Score = 65.5 bits (158), Expect(2) = 3e-29
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = +2

Query: 230 PKTPTEKERMTKIPHDSTIGSIMYAMICTRPDFSYVLNKMSRY*LNPDESNW 385
           P+T  E+ +M+ IP+ S IGSIMYAM+CT PD SY L+  SRY  +P ES+W
Sbjct: 814 PQTTDERNKMSVIPYASAIGSIMYAMLCTHPDVSYALSATSRYQSDPGESHW 865


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550379|gb|ABA93176.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 938

 Score = 87.0 bits (214), Expect(2) = 3e-29
 Identities = 41/74 (55%), Positives = 56/74 (75%)
 Frame = +3

Query: 6   NDIPTLTSVKTWLRNYFSMKDLTDDAYVLGIKIYRDXXXXXXXXXHSTYINKVVNKFSME 185
           NDIP L SVKT L+N FSMKDL + AY+LGI+IY+D          STYI+KV+ +F+M+
Sbjct: 719 NDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYKDRSKRLIGLSQSTYIDKVLKRFNMQ 778

Query: 186 ENNKGFLPISYGIS 227
           ++ KGFLP+S+GI+
Sbjct: 779 DSKKGFLPMSHGIN 792



 Score = 66.2 bits (160), Expect(2) = 3e-29
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = +2

Query: 230 PKTPTEKERMTKIPHDSTIGSIMYAMICTRPDFSYVLNKMSRY*LNPDESNW 385
           P+T  E+ +M+ IP+ S IGSIMYAM+CTRPD SY L+  S+Y  +P ES+W
Sbjct: 799 PQTTNERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSQYQSDPGESHW 850


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
            gi|62701883|gb|AAX92956.1| retrotransposon protein,
            putative, Ty1-copia sub-class [Oryza sativa Japonica
            Group] gi|108864259|gb|ABA92827.2| retrotransposon
            protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score = 85.1 bits (209), Expect(2) = 6e-29
 Identities = 41/74 (55%), Positives = 55/74 (74%)
 Frame = +3

Query: 6    NDIPTLTSVKTWLRNYFSMKDLTDDAYVLGIKIYRDXXXXXXXXXHSTYINKVVNKFSME 185
            NDI  L SVKT L+N FSMKDL + AY+LGI+IYRD          STYI+KV+ +F+M+
Sbjct: 871  NDISMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKVLKRFNMQ 930

Query: 186  ENNKGFLPISYGIS 227
            ++ KGFLP+S+GI+
Sbjct: 931  DSKKGFLPMSHGIN 944



 Score = 67.4 bits (163), Expect(2) = 6e-29
 Identities = 30/52 (57%), Positives = 39/52 (75%)
 Frame = +2

Query: 230  PKTPTEKERMTKIPHDSTIGSIMYAMICTRPDFSYVLNKMSRY*LNPDESNW 385
            P+T  E+ +M+ IP+ S IGSIMYAM+CTRPD SY L+  SRY  +P ES+W
Sbjct: 951  PQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGESHW 1002


>emb|CAE03845.1| OSJNBb0089K06.4 [Oryza sativa Japonica Group]
          Length = 873

 Score = 90.1 bits (222), Expect(2) = 8e-29
 Identities = 43/74 (58%), Positives = 56/74 (75%)
 Frame = +3

Query: 6   NDIPTLTSVKTWLRNYFSMKDLTDDAYVLGIKIYRDXXXXXXXXXHSTYINKVVNKFSME 185
           NDIP L SVKT L+N FSMKDL + AY+LGI+IYRD          STYI+KV+ +F+M+
Sbjct: 697 NDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLVGLSQSTYIDKVLKRFNMQ 756

Query: 186 ENNKGFLPISYGIS 227
           ++ KGFLP+SYGI+
Sbjct: 757 DSKKGFLPMSYGIN 770



 Score = 62.0 bits (149), Expect(2) = 8e-29
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +2

Query: 230 PKTPTEKERMTKIPHDSTIGSIMYAMICTRPDFSYVLNKMSRY*LNPDESNW 385
           P+T  E+ +M+ IP+ S IGSIMYAM+CTR D SY L+  +RY  +P ES+W
Sbjct: 777 PQTTDERNKMSVIPYASAIGSIMYAMLCTRLDVSYALSVTNRYQSDPGESHW 828


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score = 86.3 bits (212), Expect(2) = 2e-28
 Identities = 43/74 (58%), Positives = 53/74 (71%)
 Frame = +3

Query: 6    NDIPTLTSVKTWLRNYFSMKDLTDDAYVLGIKIYRDXXXXXXXXXHSTYINKVVNKFSME 185
            NDIP L SVK  L+N FSMKDL + AY+LGIKIYRD          STYI+KV+ +F+M+
Sbjct: 996  NDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYIDKVLIRFNMQ 1055

Query: 186  ENNKGFLPISYGIS 227
               KGFLP+S+GIS
Sbjct: 1056 NTKKGFLPMSHGIS 1069



 Score = 64.3 bits (155), Expect(2) = 2e-28
 Identities = 30/52 (57%), Positives = 36/52 (69%)
 Frame = +2

Query: 230  PKTPTEKERMTKIPHDSTIGSIMYAMICTRPDFSYVLNKMSRY*LNPDESNW 385
            P T  E++RM  IP+ S IGSIMYAMICTR D SY L+  SRY  +P E +W
Sbjct: 1076 PSTTDERDRMNGIPYASAIGSIMYAMICTRQDVSYALSVTSRYQADPGECHW 1127