BLASTX nr result

ID: Atractylodes21_contig00039105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039105
         (1007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523906.1| RNA-binding region-containing protein, putat...   275   1e-71
ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|2...   275   1e-71
ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265...   274   2e-71
ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|1...   272   8e-71
ref|XP_004169901.1| PREDICTED: uncharacterized protein LOC101231...   260   3e-67

>ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223536836|gb|EEF38475.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 256

 Score =  275 bits (703), Expect = 1e-71
 Identities = 160/259 (61%), Positives = 175/259 (67%), Gaps = 6/259 (2%)
 Frame = -3

Query: 759 VGPFGDTTLTKVFVGGLAWETPKEVMRDHFHKYGEILEAVIISDKTTGRSKGYGFVTFKE 580
           VGPFGDTTLTKVFVGGLAWETPKE MR+HF KYGEILEAVIISDK TGRSKGYGFVTFKE
Sbjct: 7   VGPFGDTTLTKVFVGGLAWETPKEAMREHFEKYGEILEAVIISDKLTGRSKGYGFVTFKE 66

Query: 579 PEAAKKACQDPTPVINGRRANCNLASLGARRQRSLTVV---XXXXXXXXQTGNNMIVGPR 409
           PEAAKKAC+D TP+INGRRANCNLASLGARR RS T             Q G+N    P 
Sbjct: 67  PEAAKKACEDATPMINGRRANCNLASLGARRPRSATQAPPPQPPPPPPPQQGSNHGQRPS 126

Query: 408 SGGTMTPPPSHVQW-XXXXXXXXXXXXXXHQAAVPYYGYAPATYVATTDVSYNHKVGYTG 232
           S      P +HVQW               H  AVP+YGY P TYVA TD+SYNHK+ YTG
Sbjct: 127 SAA----PANHVQWYYPAGSPASPYHHHHHHQAVPFYGYTP-TYVA-TDISYNHKLSYTG 180

Query: 231 GAYMNG--GHYYPSQPALMPMYHPMSMYQYHHPHHQSQAMGLPAHFFCSPTSAGPIAAVP 58
           G+YMNG     YP Q A+M     M MY  +H  HQSQ MGLPAH F   T+AGPI  VP
Sbjct: 181 GSYMNGHFSQVYPGQ-AIMGANTLMPMYPLYH-FHQSQTMGLPAHIF-PQTTAGPITTVP 237

Query: 57  ALLSKPTQITPTAAAVCLA 1
            ++SKP  I P  + VCLA
Sbjct: 238 TIMSKPPSIAP--SPVCLA 254


>ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|222851860|gb|EEE89407.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  275 bits (703), Expect = 1e-71
 Identities = 156/257 (60%), Positives = 176/257 (68%), Gaps = 3/257 (1%)
 Frame = -3

Query: 762 GVGPFGDTTLTKVFVGGLAWETPKEVMRDHFHKYGEILEAVIISDKTTGRSKGYGFVTFK 583
           GVG FGDTTLTKVFVGGLAWETPKE +R+HF KYGEILEAVIISDK TGRSKGYGFVTFK
Sbjct: 6   GVGQFGDTTLTKVFVGGLAWETPKEALREHFEKYGEILEAVIISDKITGRSKGYGFVTFK 65

Query: 582 EPEAAKKACQDPTPVINGRRANCNLASLGARRQRSLTVVXXXXXXXXQTGNNMIVGPRSG 403
           E  AA KAC+D  P+INGRRANCNLASLGARR RS T          Q G N+I GPRS 
Sbjct: 66  EAGAANKACEDAAPIINGRRANCNLASLGARRPRSST------PAPPQQGPNIIAGPRS- 118

Query: 402 GTMTPPPSHVQW-XXXXXXXXXXXXXXHQAAVPYYGYAPATYVATTDVSYNHKVGYTGGA 226
            T  PP +HVQW               H  AVP+YGY+PA Y+A TD+SYNHK+ YTGG+
Sbjct: 119 -TPAPPANHVQWYYPAGSAAASPFHHQHHQAVPFYGYSPA-YIA-TDISYNHKLSYTGGS 175

Query: 225 YMNG--GHYYPSQPALMPMYHPMSMYQYHHPHHQSQAMGLPAHFFCSPTSAGPIAAVPAL 52
           YMNG     YP Q A++     M MY  +H  HQSQA+GLPA     P +AGP+  VP +
Sbjct: 176 YMNGHFSQVYPGQ-AMVGANTLMPMYPLYH-FHQSQAVGLPAAHIFPPNTAGPMTTVPTI 233

Query: 51  LSKPTQITPTAAAVCLA 1
           +SKP  I P   AVCLA
Sbjct: 234 MSKPPSIAP-PNAVCLA 249


>ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265113 [Vitis vinifera]
          Length = 254

 Score =  274 bits (701), Expect = 2e-71
 Identities = 151/252 (59%), Positives = 171/252 (67%), Gaps = 2/252 (0%)
 Frame = -3

Query: 759 VGPFGDTTLTKVFVGGLAWETPKEVMRDHFHKYGEILEAVIISDKTTGRSKGYGFVTFKE 580
           +G FGDTTLTKVFVGGLAWETPKE MRDHF KYGEILEAVIISDK TGRSKGYGFVTFKE
Sbjct: 7   IGQFGDTTLTKVFVGGLAWETPKEAMRDHFEKYGEILEAVIISDKLTGRSKGYGFVTFKE 66

Query: 579 PEAAKKACQDPTPVINGRRANCNLASLGARRQRSLTVVXXXXXXXXQTGNNMIVGPRSGG 400
           PEAAKKAC+D TP+INGRRANCNLASLGARR RS              G+N      S  
Sbjct: 67  PEAAKKACEDATPMINGRRANCNLASLGARRPRSAA-----SSTPPHQGSN----GGSRP 117

Query: 399 TMTPPPSHVQWXXXXXXXXXXXXXXHQAAVPYYGYAPATYVATTDVSYNHKVGYTGGAYM 220
           T   P SHVQW              H  AVP+YGY+PA Y+A  D+SYNHK+ YTGG+YM
Sbjct: 118 TSAAPASHVQWYYPAGTPAPPFHHQHHQAVPFYGYSPA-YIA-ADISYNHKLSYTGGSYM 175

Query: 219 NG--GHYYPSQPALMPMYHPMSMYQYHHPHHQSQAMGLPAHFFCSPTSAGPIAAVPALLS 46
           NG     YP Q A++     M MY ++H  HQSQ MG PAH F  PT+ GP+  VPA++S
Sbjct: 176 NGHFSQVYPGQ-AMVGANALMPMYPFYH-FHQSQTMGHPAHMF-PPTTVGPMPTVPAIIS 232

Query: 45  KPTQITPTAAAV 10
           KPT + P   A+
Sbjct: 233 KPTSMAPNTGAM 244


>ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|118481097|gb|ABK92502.1|
           unknown [Populus trichocarpa]
           gi|222864314|gb|EEF01445.1| predicted protein [Populus
           trichocarpa]
          Length = 253

 Score =  272 bits (696), Expect = 8e-71
 Identities = 155/256 (60%), Positives = 177/256 (69%), Gaps = 4/256 (1%)
 Frame = -3

Query: 756 GPFGDTTLTKVFVGGLAWETPKEVMRDHFHKYGEILEAVIISDKTTGRSKGYGFVTFKEP 577
           G FGDTTLTKVFVGGLAWETPK+ MR+HF KYGEILEAVIISDK TGRSKGYGFVTFKE 
Sbjct: 9   GQFGDTTLTKVFVGGLAWETPKDAMREHFEKYGEILEAVIISDKITGRSKGYGFVTFKEA 68

Query: 576 EAAKKACQDPTPVINGRRANCNLASLGARRQRSLTVVXXXXXXXXQTGNNMIVGPRSGGT 397
           E+AKKAC+D +P+INGRRANCNLASLGARR RS T          Q G N+  GPRS  T
Sbjct: 69  ESAKKACEDASPIINGRRANCNLASLGARRPRSAT------PAPPQQGPNINAGPRS--T 120

Query: 396 MTPPPSHVQWXXXXXXXXXXXXXXHQ--AAVPYYGYAPATYVATTDVSYNHKVGYTGGAY 223
              P +HVQW              HQ   AVP+YGY+PA Y+A TD S NHK+ YTGG+Y
Sbjct: 121 PAAPANHVQWYYPAGSAAAASPFHHQHHQAVPFYGYSPA-YIA-TDTSGNHKLNYTGGSY 178

Query: 222 MNG--GHYYPSQPALMPMYHPMSMYQYHHPHHQSQAMGLPAHFFCSPTSAGPIAAVPALL 49
           MNG     YP Q A++     M MY ++H  HQSQAMGLPA     PT+AGP+  VP ++
Sbjct: 179 MNGHFSQVYPGQ-AMVGANTLMPMYPFYH-FHQSQAMGLPAAHIFPPTTAGPMTTVPTIM 236

Query: 48  SKPTQITPTAAAVCLA 1
           SKP  I P  +AVCLA
Sbjct: 237 SKPPSIAP-PSAVCLA 251


>ref|XP_004169901.1| PREDICTED: uncharacterized protein LOC101231499 [Cucumis sativus]
          Length = 266

 Score =  260 bits (665), Expect = 3e-67
 Identities = 141/252 (55%), Positives = 164/252 (65%), Gaps = 3/252 (1%)
 Frame = -3

Query: 756 GPFGDTTLTKVFVGGLAWETPKEVMRDHFHKYGEILEAVIISDKTTGRSKGYGFVTFKEP 577
           G FGDTTLTKVFVGGLAWETPKE MRDHFHK+GEILEAVIISDK TGRSKGYGFVTFK+ 
Sbjct: 18  GLFGDTTLTKVFVGGLAWETPKEAMRDHFHKFGEILEAVIISDKLTGRSKGYGFVTFKDA 77

Query: 576 EAAKKACQDPTPVINGRRANCNLASLGARRQRSLTVVXXXXXXXXQTGNNMIVGPRSGGT 397
           E+AKKAC+D  P+INGRRANCNLASLGARR  S +             N    GPR+   
Sbjct: 78  ESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQAPQPGSN--AGGPRTTSA 135

Query: 396 MTPPPSHVQWXXXXXXXXXXXXXXHQAAVPYYGYAPATYVATTDVSYNHKVGYTGGAYMN 217
            T P +HVQW                  VP+YGY+P+     TD+SYNHK+GY  G Y  
Sbjct: 136 ATAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHKLGYMNGHYT- 194

Query: 216 GGHYYPSQPALMPMYHPMSMYQYHHPHHQSQAMGLPAHFF-CSPTSAGPIAAVP--ALLS 46
               YP Q A++     M MY  +H +HQS AMG+PAH F  SPT+AGP AAVP  +++S
Sbjct: 195 --QMYPGQ-AMVGANTLMPMYPLYH-YHQSHAMGMPAHIFPPSPTTAGPFAAVPPTSIMS 250

Query: 45  KPTQITPTAAAV 10
           KPT + P    V
Sbjct: 251 KPTTVGPNPGTV 262


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