BLASTX nr result

ID: Atractylodes21_contig00039099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039099
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]    62   8e-13
emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]    45   4e-07
emb|CAN78761.1| hypothetical protein VITISV_003313 [Vitis vinifera]    44   1e-06
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         47   4e-06

>emb|CAN72567.1| hypothetical protein VITISV_044177 [Vitis vinifera]
          Length = 950

 Score = 62.0 bits (149), Expect(2) = 8e-13
 Identities = 32/50 (64%), Positives = 41/50 (82%), Gaps = 1/50 (2%)
 Frame = +2

Query: 59  DFVDTMLYGRTTITVNDVKDSLLSKELKRKVSGREEGS-GSGLFVGRGRT 205
           +FVDTM+YGR +I+ NDVKD+L SKEL++ VSG EEGS  +GL V RGR+
Sbjct: 158 NFVDTMMYGRBSISXNDVKDALQSKELQKLVSGSEEGSVETGLTVSRGRS 207



 Score = 36.2 bits (82), Expect(2) = 8e-13
 Identities = 14/19 (73%), Positives = 19/19 (100%)
 Frame = +3

Query: 3   IDDEDQALILLCSLPNSYE 59
           +++EDQA+ILLCSLP+SYE
Sbjct: 139 VEEEDQAMILLCSLPSSYE 157


>emb|CAN67309.1| hypothetical protein VITISV_028165 [Vitis vinifera]
          Length = 344

 Score = 45.4 bits (106), Expect(2) = 4e-07
 Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +2

Query: 62  FVDTMLYGRTTITVNDVKDSLLSKELKRKV-SGREEGSGSGLFVGRGRT 205
           FVD M+YGR T+ + DV+ +L S+ELK+ V   R+  SG GL V RGRT
Sbjct: 113 FVDIMMYGRGTLFIKDVRVALNSRELKKMVFKSRKYDSGEGL-VARGRT 160



 Score = 33.5 bits (75), Expect(2) = 4e-07
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +3

Query: 3   IDDEDQALILLCSLPNSYE 59
           ++ EDQA+ L+CSLPNSYE
Sbjct: 93  VNYEDQAIFLMCSLPNSYE 111


>emb|CAN78761.1| hypothetical protein VITISV_003313 [Vitis vinifera]
          Length = 836

 Score = 43.9 bits (102), Expect(2) = 1e-06
 Identities = 19/44 (43%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = +2

Query: 62  FVDTMLYGRTTITVNDVKDSLLSKELKRKVS-GREEGSGSGLFV 190
           FVDTM+YGR T+++ DV+++L  +ELK++VS  R++    G+++
Sbjct: 610 FVDTMMYGRDTLSIEDVREALNLRELKKRVSESRKDDFDEGIYL 653



 Score = 33.1 bits (74), Expect(2) = 1e-06
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +3

Query: 3   IDDEDQALILLCSLPNSY 56
           IDDEDQA+ L+ SLPNSY
Sbjct: 590 IDDEDQAMTLISSLPNSY 607


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 47.4 bits (111), Expect(2) = 4e-06
 Identities = 25/50 (50%), Positives = 32/50 (64%)
 Frame = +2

Query: 62  FVDTMLYGRTTITVNDVKDSLLSKELKRKVSGREEGSGSGLFVGRGRTPD 211
           FVDTMLYGRTT+T+ DVK SL SKE+++     E  +G GL     +  D
Sbjct: 162 FVDTMLYGRTTLTLEDVKASLSSKEIQKNCE-LETSNGEGLMARTEKKKD 210



 Score = 28.1 bits (61), Expect(2) = 4e-06
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 3   IDDEDQALILLCSLPNSYE 59
           I DED+A  LL SLP SYE
Sbjct: 142 ICDEDKAFFLLSSLPKSYE 160


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