BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039094
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   496   e-138
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     489   e-136
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   488   e-136
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   486   e-135
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   476   e-132

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
            putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  496 bits (1277), Expect = e-138
 Identities = 233/334 (69%), Positives = 279/334 (83%)
 Frame = +3

Query: 3    EDEPCAYVRTSGNNKVFLVLYVDDILLIGNDIPTLTEVKTWLGTCFAMKDLGEASYILGI 182
            E+EPC Y +TSG+   FLVLYVDDILL+GNDIP L  VKTWLG+CF+MKD+GEA+YILGI
Sbjct: 618  EEEPCVYKKTSGSAVAFLVLYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGI 677

Query: 183  KIYRDRSKRLIGLSQSMYIDKVLKRFRMDESKKGFIPMQHGLTLSKAQSPSSPEELEEMR 362
            +IYRDR  ++IGLSQ  YIDKVL RF M +SKKGFIPM HG+TLSK Q PS+ +E E M 
Sbjct: 678  RIYRDRLNKIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMS 737

Query: 363  NVPYASAVGSIMYAMPCTRPDVSCALSMTSRYQSNPGKAHWIAVKNILKYLRRTKDMFLI 542
             +PYASA+GSIMYAM  TRPDV+CALSMTSRYQS+PG++HWI V+NI KYLRRTKD FL+
Sbjct: 738  KIPYASAIGSIMYAMLYTRPDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLV 797

Query: 543  YGGESELSVKGYTDASFQTDKDDSRSQSGFVFLLNGGAVSWKSKKQETVADSTTEAEYIA 722
            YGG  EL V GYTDASFQTDKDD RSQSGF F LNGGAVSWKS KQ TVADSTTEAEYIA
Sbjct: 798  YGGSEELVVSGYTDASFQTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIA 857

Query: 723  ANDAVKEAVWVKKFIRDLGVVPSIESPVQIFCDNEGAVTLAQEPRSHKRTRHILRKYHYI 902
            A++A KE VW++KFI +LGVVPSI  P+ ++CDN GA+  A+EP+SH++++HI R+YH I
Sbjct: 858  ASEAAKEVVWIRKFITELGVVPSISGPIDLYCDNNGAIAQAKEPKSHQKSKHIQRRYHLI 917

Query: 903  REVVASGEVVINRVHTDSNLADPFTKPLTQTKHD 1004
            RE++  G+V I+RV TD+N+AD FTKPL Q KH+
Sbjct: 918  REIIDRGDVKISRVSTDANVADHFTKPLPQPKHE 951


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  489 bits (1258), Expect = e-136
 Identities = 237/334 (70%), Positives = 278/334 (83%)
 Frame = +3

Query: 3    EDEPCAYVRTSGNNKVFLVLYVDDILLIGNDIPTLTEVKTWLGTCFAMKDLGEASYILGI 182
            E+E C Y + SG+  VFL+LYVDDILLIGNDIP L  VK+ L   F+MKDLGEA+YILGI
Sbjct: 971  EEEACVYKKVSGSAIVFLILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGI 1030

Query: 183  KIYRDRSKRLIGLSQSMYIDKVLKRFRMDESKKGFIPMQHGLTLSKAQSPSSPEELEEMR 362
            +IYRDRSKRLIGLSQS YIDKVLKRF M +SKKGF+PM HG+ LSK Q P + +E  +M 
Sbjct: 1031 RIYRDRSKRLIGLSQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMG 1090

Query: 363  NVPYASAVGSIMYAMPCTRPDVSCALSMTSRYQSNPGKAHWIAVKNILKYLRRTKDMFLI 542
             VPYASA+GSIMYAM CTRPDVS ALS TSRYQS+PG+ HW AVKNILKYLRRTKDMFL+
Sbjct: 1091 MVPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLV 1150

Query: 543  YGGESELSVKGYTDASFQTDKDDSRSQSGFVFLLNGGAVSWKSKKQETVADSTTEAEYIA 722
            YGGE +L V GYTDASFQTDKDD RSQSGFVF LNGGAVSWKS KQ+TVADSTTEAEYIA
Sbjct: 1151 YGGEEDLVVSGYTDASFQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIA 1210

Query: 723  ANDAVKEAVWVKKFIRDLGVVPSIESPVQIFCDNEGAVTLAQEPRSHKRTRHILRKYHYI 902
            A++A KEAVW+KKF+ +LGV+ S   P+ ++CDN GA+  A+EPRSH++++HILR+YH I
Sbjct: 1211 ASEAAKEAVWIKKFVSELGVMTSTTGPMSLYCDNSGAIAQAKEPRSHQKSKHILRRYHLI 1270

Query: 903  REVVASGEVVINRVHTDSNLADPFTKPLTQTKHD 1004
            RE+V  G+V I +VHTD N+ADP TKPL Q KH+
Sbjct: 1271 REIVDRGDVKICKVHTDLNIADPLTKPLPQPKHE 1304


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  488 bits (1257), Expect = e-136
 Identities = 230/334 (68%), Positives = 282/334 (84%)
 Frame = +3

Query: 3    EDEPCAYVRTSGNNKVFLVLYVDDILLIGNDIPTLTEVKTWLGTCFAMKDLGEASYILGI 182
            ++EPC Y++ SG+  V L+LYVDDILL+GNDIP L  VK+ L   F+MKDLG+A+YILGI
Sbjct: 551  KEEPCVYMKVSGSTLVILILYVDDILLVGNDIPMLESVKSSLRKSFSMKDLGDAAYILGI 610

Query: 183  KIYRDRSKRLIGLSQSMYIDKVLKRFRMDESKKGFIPMQHGLTLSKAQSPSSPEELEEMR 362
            +IYRDRSKRLIGLSQ MYIDKVL RF M  SK+GF+PM HG+ LSK Q P++ +E ++M 
Sbjct: 611  RIYRDRSKRLIGLSQEMYIDKVLNRFNMQNSKRGFLPMAHGINLSKNQCPTTTDERDKMS 670

Query: 363  NVPYASAVGSIMYAMPCTRPDVSCALSMTSRYQSNPGKAHWIAVKNILKYLRRTKDMFLI 542
            ++PYASA+GSIMYAM CTRPDVS ALS+TSRYQ++P + HW AVKNILKYLRRTKD+FL+
Sbjct: 671  DIPYASAIGSIMYAMICTRPDVSYALSVTSRYQADPSEGHWTAVKNILKYLRRTKDVFLV 730

Query: 543  YGGESELSVKGYTDASFQTDKDDSRSQSGFVFLLNGGAVSWKSKKQETVADSTTEAEYIA 722
            YGG+ EL V GYTDASFQTDKDD RSQSGFVF+LNGGAVSWKS KQETVADSTTEAEYIA
Sbjct: 731  YGGDEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTEAEYIA 790

Query: 723  ANDAVKEAVWVKKFIRDLGVVPSIESPVQIFCDNEGAVTLAQEPRSHKRTRHILRKYHYI 902
            A++A KE VW++ FI +LG+VPS  SP+ ++CDN GA+  A+EPRSH++++HILR+YH I
Sbjct: 791  ASEAAKEGVWIRNFITELGMVPSASSPMDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLI 850

Query: 903  REVVASGEVVINRVHTDSNLADPFTKPLTQTKHD 1004
            RE+V  G+V I +VHTD N+ADP TKPLTQ KH+
Sbjct: 851  RELVDRGDVKICKVHTDLNIADPLTKPLTQPKHE 884


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  486 bits (1250), Expect = e-135
 Identities = 232/334 (69%), Positives = 279/334 (83%)
 Frame = +3

Query: 3    EDEPCAYVRTSGNNKVFLVLYVDDILLIGNDIPTLTEVKTWLGTCFAMKDLGEASYILGI 182
            ++EPC Y++ SG+  V L+LYVDDILLIGNDIP L  VK  L   F+MKDLGEA+YILGI
Sbjct: 967  KEEPCVYMKVSGSTLVILILYVDDILLIGNDIPMLESVKASLKNSFSMKDLGEAAYILGI 1026

Query: 183  KIYRDRSKRLIGLSQSMYIDKVLKRFRMDESKKGFIPMQHGLTLSKAQSPSSPEELEEMR 362
            KIYRDRS+RLIGLSQS YIDKVL RF M  +KKGF+PM HG++ SK+Q PS+ +E + M 
Sbjct: 1027 KIYRDRSRRLIGLSQSTYIDKVLIRFNMQNTKKGFLPMSHGISPSKSQRPSTTDERDRMN 1086

Query: 363  NVPYASAVGSIMYAMPCTRPDVSCALSMTSRYQSNPGKAHWIAVKNILKYLRRTKDMFLI 542
             +PYASA+GSIMYAM CTR DVS ALS+TSRYQ++PG+ HW AVKNILKYLRRTKD FLI
Sbjct: 1087 GIPYASAIGSIMYAMICTRQDVSYALSVTSRYQADPGECHWTAVKNILKYLRRTKDAFLI 1146

Query: 543  YGGESELSVKGYTDASFQTDKDDSRSQSGFVFLLNGGAVSWKSKKQETVADSTTEAEYIA 722
            YGG+ EL V GYTDASFQTDKDD RSQSGFVF+LNGGAVSWKS KQETVADSTT+AEYIA
Sbjct: 1147 YGGDEELVVNGYTDASFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTKAEYIA 1206

Query: 723  ANDAVKEAVWVKKFIRDLGVVPSIESPVQIFCDNEGAVTLAQEPRSHKRTRHILRKYHYI 902
            A++A KE VW++ FI +LGVVPS  SP+ ++CDN GA+  A+EPRSH++++HILR+YH I
Sbjct: 1207 ASEAAKEGVWIRNFIAELGVVPSASSPMDLYCDNNGAIAQAKEPRSHQKSKHILRRYHLI 1266

Query: 903  REVVASGEVVINRVHTDSNLADPFTKPLTQTKHD 1004
            RE+V  G+V I ++HTD N+ADP TKPLTQ KH+
Sbjct: 1267 RELVDRGDVKICKIHTDLNVADPLTKPLTQPKHE 1300


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  476 bits (1226), Expect = e-132
 Identities = 232/328 (70%), Positives = 273/328 (83%)
 Frame = +3

Query: 3    EDEPCAYVRTSGNNKVFLVLYVDDILLIGNDIPTLTEVKTWLGTCFAMKDLGEASYILGI 182
            E+EPC Y + SG+  VFL+LYVDDILLIGNDIP L  VKT L   F+MKDLGEA+YILGI
Sbjct: 920  EEEPCVYKKISGSALVFLILYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGI 979

Query: 183  KIYRDRSKRLIGLSQSMYIDKVLKRFRMDESKKGFIPMQHGLTLSKAQSPSSPEELEEMR 362
            +IYRDRSKRLIGLSQS YIDKVLKRF M +SKKGF+PM HG+ L K Q P + +E  +M 
Sbjct: 980  RIYRDRSKRLIGLSQSTYIDKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMS 1039

Query: 363  NVPYASAVGSIMYAMPCTRPDVSCALSMTSRYQSNPGKAHWIAVKNILKYLRRTKDMFLI 542
             +PYASA+GSIMYAM CTR DVS ALS TSRYQS+ G++HWIAVKNILKYLRRTKDMFL+
Sbjct: 1040 VIPYASAIGSIMYAMLCTRLDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLV 1099

Query: 543  YGGESELSVKGYTDASFQTDKDDSRSQSGFVFLLNGGAVSWKSKKQETVADSTTEAEYIA 722
            YG + EL V GYTDASFQTDKDD RSQSGFVF LNGGAVSWKS KQ+TVADSTTEAEYIA
Sbjct: 1100 YGRQEELVVNGYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIA 1159

Query: 723  ANDAVKEAVWVKKFIRDLGVVPSIESPVQIFCDNEGAVTLAQEPRSHKRTRHILRKYHYI 902
            A++A KEAVW+KKF+  LGV+ S  SP+ ++CDN GA+  A+EPRSH++++HILR+YH I
Sbjct: 1160 ASEAAKEAVWIKKFVSQLGVMTSASSPMDLYCDNSGAIAQAKEPRSHQKSKHILRRYHLI 1219

Query: 903  REVVASGEVVINRVHTDSNLADPFTKPL 986
            RE+V  G+V I ++HTD N+ADP TKPL
Sbjct: 1220 REMVGRGDVKICKIHTDLNVADPLTKPL 1247