BLASTX nr result

ID: Atractylodes21_contig00039078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039078
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23583.3| unnamed protein product [Vitis vinifera]              145   4e-33
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...   145   4e-33
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]   145   4e-33
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...   119   2e-25
ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   119   3e-25

>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/101 (72%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1   RKVSLAVIENGDFEEEADWLLVGRTAITGLSTTKGRKLEDNEIVHFAFPSTDSRSK-SGY 177
           R V+  ++E+GDF EE DW LVGRT I GLSTTKGRKL DNEIVHF+FPS D R+K +  
Sbjct: 309 RPVTSVLVEDGDFPEEPDWFLVGRTPIIGLSTTKGRKLVDNEIVHFSFPSADLRNKCNSK 368

Query: 178 WVSSRAANAASGIVRFSTKRSGEIGRLPMEWSKCLIPLVNS 300
           WV+ +AA+AAS IVRFSTKRSGEIGRLPMEW+KC+IPLVNS
Sbjct: 369 WVA-KAASAASAIVRFSTKRSGEIGRLPMEWTKCIIPLVNS 408


>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Vitis vinifera]
          Length = 1224

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/101 (72%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1   RKVSLAVIENGDFEEEADWLLVGRTAITGLSTTKGRKLEDNEIVHFAFPSTDSRSK-SGY 177
           R V+  ++E+GDF EE DW LVGRT I GLSTTKGRKL DNEIVHF+FPS D R+K +  
Sbjct: 309 RPVTSVLVEDGDFPEEPDWFLVGRTPIIGLSTTKGRKLVDNEIVHFSFPSADLRNKCNSK 368

Query: 178 WVSSRAANAASGIVRFSTKRSGEIGRLPMEWSKCLIPLVNS 300
           WV+ +AA+AAS IVRFSTKRSGEIGRLPMEW+KC+IPLVNS
Sbjct: 369 WVA-KAASAASAIVRFSTKRSGEIGRLPMEWTKCIIPLVNS 408


>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score =  145 bits (365), Expect = 4e-33
 Identities = 73/101 (72%), Positives = 85/101 (84%), Gaps = 1/101 (0%)
 Frame = +1

Query: 1   RKVSLAVIENGDFEEEADWLLVGRTAITGLSTTKGRKLEDNEIVHFAFPSTDSRSK-SGY 177
           R V+  ++E+GDF EE DW LVGRT I GLSTTKGRKL DNEIVHF+FPS D R+K +  
Sbjct: 309 RPVTSVLVEDGDFPEEPDWFLVGRTPIIGLSTTKGRKLVDNEIVHFSFPSADLRNKCNSK 368

Query: 178 WVSSRAANAASGIVRFSTKRSGEIGRLPMEWSKCLIPLVNS 300
           WV+ +AA+AAS IVRFSTKRSGEIGRLPMEW+KC+IPLVNS
Sbjct: 369 WVA-KAASAASAIVRFSTKRSGEIGRLPMEWTKCIIPLVNS 408


>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1051

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/100 (60%), Positives = 71/100 (71%)
 Frame = +1

Query: 1   RKVSLAVIENGDFEEEADWLLVGRTAITGLSTTKGRKLEDNEIVHFAFPSTDSRSKSGYW 180
           R ++   +E+GDF +E DW LVG T +T LSTTKGRKL DNEIVHF FP+T+ R  S + 
Sbjct: 170 RTINGVKVEDGDFPQEKDWYLVGSTMLTALSTTKGRKLVDNEIVHFVFPNTNFRFNSQW- 228

Query: 181 VSSRAANAASGIVRFSTKRSGEIGRLPMEWSKCLIPLVNS 300
                      IVRFSTKRSGEIGRLPMEW KC++PLVNS
Sbjct: 229 -----------IVRFSTKRSGEIGRLPMEWGKCVVPLVNS 257


>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Cucumis sativus]
           gi|449523563|ref|XP_004168793.1| PREDICTED: putative
           SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 3-like
           [Cucumis sativus]
          Length = 1113

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/94 (63%), Positives = 69/94 (73%)
 Frame = +1

Query: 22  IENGDFEEEADWLLVGRTAITGLSTTKGRKLEDNEIVHFAFPSTDSRSKSGYWVSSRAAN 201
           IE+GDF  E DW LVGRT +T +STTKG KL DNEIV+FAFPS+ SR             
Sbjct: 224 IEDGDFPIEPDWFLVGRTVVTAMSTTKGNKLADNEIVNFAFPSSSSRFN----------- 272

Query: 202 AASGIVRFSTKRSGEIGRLPMEWSKCLIPLVNSK 303
            A  IVRFSTKRSGEIGRLPMEW+KC++PLVNS+
Sbjct: 273 -AQWIVRFSTKRSGEIGRLPMEWAKCVVPLVNSQ 305


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