BLASTX nr result

ID: Atractylodes21_contig00039069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039069
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|2...   274   9e-72
emb|CBI35666.3| unnamed protein product [Vitis vinifera]              268   5e-70
ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi...   266   3e-69
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi...   263   2e-68
ref|XP_002873605.1| pentatricopeptide repeat-containing protein ...   239   3e-61

>ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|222846600|gb|EEE84147.1|
            predicted protein [Populus trichocarpa]
          Length = 684

 Score =  274 bits (700), Expect = 9e-72
 Identities = 127/183 (69%), Positives = 154/183 (84%)
 Frame = -2

Query: 593  KIAAENLQLLDPHDTAAYVLMFNLHASSEHWEEAGRVRKMMAERNLRKEVSCSWISIKGK 414
            ++AAENL  LDP DTA Y+LMFNL+AS   W+EA  VRKMMAERNLRKE+SCSWI++KGK
Sbjct: 502  ELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGK 561

Query: 413  VHRFVVGDRHHPQSQEIYSKLKEFDFSKDNNQEVLLTEDDVSHILPERKEQLLDHSERLA 234
            VHRF+VGD+HHPQ++EIYSKL+  + S    +  LLTE+DVS+ LPERKEQLL HSERLA
Sbjct: 562  VHRFIVGDKHHPQTEEIYSKLEALNDSVIKEETGLLTEEDVSNSLPERKEQLLVHSERLA 621

Query: 233  IAYGLISIGKGSPITIFKNLRACKDCHEFAKRVSMITGREIIVRDANRFHHFKSGECSCG 54
            +A+GLIS    +P+ +FKNLRACKDCH+F K+VS+ITGREI+VRD+ RFHHFK GECSC 
Sbjct: 622  LAFGLISTPSSAPVVVFKNLRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCN 681

Query: 53   DYW 45
            DYW
Sbjct: 682  DYW 684


>emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  268 bits (685), Expect = 5e-70
 Identities = 128/184 (69%), Positives = 153/184 (83%), Gaps = 1/184 (0%)
 Frame = -2

Query: 593  KIAAENLQLLDPHDTAAYVLMFNLHASSEHWEEAGRVRKMMAERNLRKEVSCSWISIKGK 414
            KIAAENL  LDP DTA Y+L+FNL+++   WEEAG VRK+MAER L+KEVSCSWIS+KG+
Sbjct: 579  KIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQ 638

Query: 413  VHRFVVGDRHHPQSQEIYSKLKEFDFSK-DNNQEVLLTEDDVSHILPERKEQLLDHSERL 237
            VHRFVVGDRHHPQ++ IYSKL+EF  S  D+   +L  EDDVS  L  RKEQLLDHSE+L
Sbjct: 639  VHRFVVGDRHHPQTEAIYSKLEEFKCSVIDSPVRLLNEEDDVSCSLSARKEQLLDHSEKL 698

Query: 236  AIAYGLISIGKGSPITIFKNLRACKDCHEFAKRVSMITGREIIVRDANRFHHFKSGECSC 57
            AIA+GLIS    +PI +FKNLRAC+DCHEF K+VSM+TGR+I+VRD+ RFHHFKSG+CSC
Sbjct: 699  AIAFGLISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSC 758

Query: 56   GDYW 45
             DYW
Sbjct: 759  NDYW 762


>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Glycine max]
          Length = 765

 Score =  266 bits (679), Expect = 3e-69
 Identities = 124/182 (68%), Positives = 149/182 (81%)
 Frame = -2

Query: 590  IAAENLQLLDPHDTAAYVLMFNLHASSEHWEEAGRVRKMMAERNLRKEVSCSWISIKGKV 411
            IAA+N+  LDP D+A YV+MFNL+A +  W+EA + RKMMAERNLRKEVSCSWI +KGKV
Sbjct: 584  IAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKV 643

Query: 410  HRFVVGDRHHPQSQEIYSKLKEFDFSKDNNQEVLLTEDDVSHILPERKEQLLDHSERLAI 231
            HRFVVGDRHHPQ+++IYSKLKE +FS   ++E LL E++      ERKEQLLDHSERLAI
Sbjct: 644  HRFVVGDRHHPQTEQIYSKLKELNFSFKKSKERLLNEENALCDFTERKEQLLDHSERLAI 703

Query: 230  AYGLISIGKGSPITIFKNLRACKDCHEFAKRVSMITGREIIVRDANRFHHFKSGECSCGD 51
            AYGLI     +PI +FKN R+CKDCH+FAKRVS++TGRE++VRD NRFHH  SGECSC D
Sbjct: 704  AYGLICTAADTPIMVFKNTRSCKDCHDFAKRVSIVTGRELVVRDGNRFHHINSGECSCRD 763

Query: 50   YW 45
            YW
Sbjct: 764  YW 765


>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Glycine max]
          Length = 753

 Score =  263 bits (672), Expect = 2e-68
 Identities = 123/182 (67%), Positives = 147/182 (80%)
 Frame = -2

Query: 590  IAAENLQLLDPHDTAAYVLMFNLHASSEHWEEAGRVRKMMAERNLRKEVSCSWISIKGKV 411
            IAA+N+  LDP D+A YV+MFNL+A +  W+EA + RKMMAERNLRKEVSCSWI +KGKV
Sbjct: 572  IAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEVSCSWIIVKGKV 631

Query: 410  HRFVVGDRHHPQSQEIYSKLKEFDFSKDNNQEVLLTEDDVSHILPERKEQLLDHSERLAI 231
            HRFVVGDRHHPQ+++IYSKLKE + S    +E LL E++      ERK+QLLDHSERLAI
Sbjct: 632  HRFVVGDRHHPQTEQIYSKLKELNVSFKKGEERLLNEENALCDFTERKDQLLDHSERLAI 691

Query: 230  AYGLISIGKGSPITIFKNLRACKDCHEFAKRVSMITGREIIVRDANRFHHFKSGECSCGD 51
            AYGLI     +PI +FKN R+CKDCHEFAKRVS++TGRE++VRD NRFHH  SGECSC D
Sbjct: 692  AYGLICTAADTPIMVFKNTRSCKDCHEFAKRVSVVTGRELVVRDGNRFHHINSGECSCRD 751

Query: 50   YW 45
            YW
Sbjct: 752  YW 753


>ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297319442|gb|EFH49864.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 750

 Score =  239 bits (609), Expect = 3e-61
 Identities = 115/185 (62%), Positives = 137/185 (74%), Gaps = 2/185 (1%)
 Frame = -2

Query: 593  KIAAENLQLLDPHDTAAYVLMFNLHASSEHWEEAGRVRKMMAERNLRKEVSCSWISIKGK 414
            KIA E L+ LDP DTA YVL FNL+  +  WEEA  V K+M ER L+KE+SCSWI  KGK
Sbjct: 574  KIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGK 633

Query: 413  VHRFVVGDRHHPQSQEIYSKLKEFDFSKDNNQEVLLTEDDVSHILPERKEQLLDHSERLA 234
            +HRF+VGD+HHPQSQEIY KLKEFD          +  D     + ER+EQLLDHSERLA
Sbjct: 634  IHRFIVGDKHHPQSQEIYEKLKEFD--------GFMEGDMFQCSMTERREQLLDHSERLA 685

Query: 233  IAYGLISIGKG--SPITIFKNLRACKDCHEFAKRVSMITGREIIVRDANRFHHFKSGECS 60
            IA+GLIS+     +PI +FKNLRAC DCHEFAK VS++TG EI++RD+ RFHHFK G+CS
Sbjct: 686  IAFGLISVNGNARAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCS 745

Query: 59   CGDYW 45
            C DYW
Sbjct: 746  CNDYW 750


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