BLASTX nr result

ID: Atractylodes21_contig00039035 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039035
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containi...    92   8e-33
emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]    92   8e-33
emb|CBI37462.3| unnamed protein product [Vitis vinifera]               92   8e-33
ref|XP_004162522.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    88   1e-31
ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-31

>ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Vitis vinifera]
          Length = 709

 Score = 92.0 bits (227), Expect(2) = 8e-33
 Identities = 43/71 (60%), Positives = 59/71 (83%), Gaps = 3/71 (4%)
 Frame = +1

Query: 22  NPENSNMERSLNQAGVQLTTSLVMEVLGSLRYQEKLAFRFFTWAGNQENYSHEPQAYNEM 201
           NPE S+ME++L+  GV+LTT LV+E+LG + ++EK+AFRFF WAG+Q+ YSHEP+AYNEM
Sbjct: 248 NPE-SDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDCYSHEPRAYNEM 306

Query: 202 IDTI---KYKI 225
           ID +   KYK+
Sbjct: 307 IDILSSTKYKV 317



 Score = 73.6 bits (179), Expect(2) = 8e-33
 Identities = 39/73 (53%), Positives = 47/73 (64%)
 Frame = +2

Query: 206 ILSNTKYKAKQYRIVCDLLDYMKRNDKISVPIEALLKILRQYADXXXXXXXXXXXXXXXX 385
           ILS+TKYK KQ+RIVCD+LDYMKRNDK SVP+E LL ILR+Y +                
Sbjct: 309 ILSSTKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLMILRKYTE-KHLAHLHKFAKKKKI 367

Query: 386 XXXMQPEIDAFNV 424
               QPEI+A N+
Sbjct: 368 RVKTQPEINALNL 380


>emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
          Length = 708

 Score = 92.0 bits (227), Expect(2) = 8e-33
 Identities = 43/71 (60%), Positives = 59/71 (83%), Gaps = 3/71 (4%)
 Frame = +1

Query: 22  NPENSNMERSLNQAGVQLTTSLVMEVLGSLRYQEKLAFRFFTWAGNQENYSHEPQAYNEM 201
           NPE S+ME++L+  GV+LTT LV+E+LG + ++EK+AFRFF WAG+Q+ YSHEP+AYNEM
Sbjct: 221 NPE-SDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDCYSHEPRAYNEM 279

Query: 202 IDTI---KYKI 225
           ID +   KYK+
Sbjct: 280 IDILSSTKYKV 290



 Score = 73.6 bits (179), Expect(2) = 8e-33
 Identities = 39/73 (53%), Positives = 47/73 (64%)
 Frame = +2

Query: 206 ILSNTKYKAKQYRIVCDLLDYMKRNDKISVPIEALLKILRQYADXXXXXXXXXXXXXXXX 385
           ILS+TKYK KQ+RIVCD+LDYMKRNDK SVP+E LL ILR+Y +                
Sbjct: 282 ILSSTKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLMILRKYTE-KHLAHLHKFAKKKKI 340

Query: 386 XXXMQPEIDAFNV 424
               QPEI+A N+
Sbjct: 341 RVKTQPEINALNL 353


>emb|CBI37462.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score = 92.0 bits (227), Expect(2) = 8e-33
 Identities = 43/71 (60%), Positives = 59/71 (83%), Gaps = 3/71 (4%)
 Frame = +1

Query: 22  NPENSNMERSLNQAGVQLTTSLVMEVLGSLRYQEKLAFRFFTWAGNQENYSHEPQAYNEM 201
           NPE S+ME++L+  GV+LTT LV+E+LG + ++EK+AFRFF WAG+Q+ YSHEP+AYNEM
Sbjct: 248 NPE-SDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQDCYSHEPRAYNEM 306

Query: 202 IDTI---KYKI 225
           ID +   KYK+
Sbjct: 307 IDILSSTKYKV 317



 Score = 73.6 bits (179), Expect(2) = 8e-33
 Identities = 39/73 (53%), Positives = 47/73 (64%)
 Frame = +2

Query: 206 ILSNTKYKAKQYRIVCDLLDYMKRNDKISVPIEALLKILRQYADXXXXXXXXXXXXXXXX 385
           ILS+TKYK KQ+RIVCD+LDYMKRNDK SVP+E LL ILR+Y +                
Sbjct: 309 ILSSTKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLMILRKYTE-KHLAHLHKFAKKKKI 367

Query: 386 XXXMQPEIDAFNV 424
               QPEI+A N+
Sbjct: 368 RVKTQPEINALNL 380


>ref|XP_004162522.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g73400, mitochondrial-like [Cucumis sativus]
          Length = 559

 Score = 88.2 bits (217), Expect(2) = 1e-31
 Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
 Frame = +1

Query: 19  NNPENSNMERSLNQAGVQLTTSLVMEVLGSLRYQEKLAFRFFTWAGNQENYSHEPQAYNE 198
           N+  + +ME +L+Q GV LTT LV ++L  LR+ EKLAFRFFTWA  QENYSHEP+ YNE
Sbjct: 96  NSYAHHDMEGALDQVGVYLTTDLVADILHRLRFDEKLAFRFFTWAARQENYSHEPRVYNE 155

Query: 199 MIDTI---KYKI 225
           MID +   +YK+
Sbjct: 156 MIDILSSTRYKV 167



 Score = 73.6 bits (179), Expect(2) = 1e-31
 Identities = 39/73 (53%), Positives = 46/73 (63%)
 Frame = +2

Query: 206 ILSNTKYKAKQYRIVCDLLDYMKRNDKISVPIEALLKILRQYADXXXXXXXXXXXXXXXX 385
           ILS+T+YK KQ+RIVCDLLDYMKRNDK +VP+E L  ILR Y D                
Sbjct: 159 ILSSTRYKVKQFRIVCDLLDYMKRNDKNTVPVEVLFGILRNYTD-KYLTCLQKFAKKKKV 217

Query: 386 XXXMQPEIDAFNV 424
               QPEI+AFN+
Sbjct: 218 IVKRQPEINAFNL 230


>ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
           mitochondrial-like [Cucumis sativus]
          Length = 559

 Score = 88.2 bits (217), Expect(2) = 1e-31
 Identities = 42/72 (58%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
 Frame = +1

Query: 19  NNPENSNMERSLNQAGVQLTTSLVMEVLGSLRYQEKLAFRFFTWAGNQENYSHEPQAYNE 198
           N+  + +ME +L+Q GV LTT LV ++L  LR+ EKLAFRFFTWA  QENYSHEP+ YNE
Sbjct: 96  NSYAHHDMEGALDQVGVYLTTDLVADILHRLRFDEKLAFRFFTWAARQENYSHEPRVYNE 155

Query: 199 MIDTI---KYKI 225
           MID +   +YK+
Sbjct: 156 MIDILSSTRYKV 167



 Score = 73.6 bits (179), Expect(2) = 1e-31
 Identities = 39/73 (53%), Positives = 46/73 (63%)
 Frame = +2

Query: 206 ILSNTKYKAKQYRIVCDLLDYMKRNDKISVPIEALLKILRQYADXXXXXXXXXXXXXXXX 385
           ILS+T+YK KQ+RIVCDLLDYMKRNDK +VP+E L  ILR Y D                
Sbjct: 159 ILSSTRYKVKQFRIVCDLLDYMKRNDKNTVPVEVLFGILRNYTD-KYLTCLQKFAKKKKV 217

Query: 386 XXXMQPEIDAFNV 424
               QPEI+AFN+
Sbjct: 218 IVKRQPEINAFNL 230


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