BLASTX nr result

ID: Atractylodes21_contig00039021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039021
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69243.1| hypothetical protein VITISV_038879 [Vitis vinifera]    69   4e-10
ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...    68   7e-10
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,...    66   3e-09
ref|XP_002298526.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera]    65   7e-09

>emb|CAN69243.1| hypothetical protein VITISV_038879 [Vitis vinifera]
          Length = 322

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 58/202 (28%)
 Frame = +2

Query: 8   EGELVVENNDDDDCKIITDRTIFDHLREKAKSLPFLAATPSN-EYPPSLETLSLIRKRSH 184
           EG   +E  +DD+CKIIT++T+F+H+R+K+KS  F   T SN    PS E L L RKR+H
Sbjct: 20  EGSPAIET-EDDECKIITEQTVFEHIRKKSKS--FNVLTKSNASVSPSSEALILTRKRTH 76

Query: 185 DRQLALNDTAEFLNLTEGS--------NPCEESSVLDGNTP------------------- 283
           ++QL L+ T E L  TE S        +P   S   + N P                   
Sbjct: 77  EQQLELHVT-EALEETERSKIPRRAMVSPFLHSREAELNGPGISKNSTTKYQPATGSLVV 135

Query: 284 -----------------SNMLTGETIFEHIRKKAKCFPRV-------------DEIKSLS 373
                            S +++ +TIF+HIR+KAK FP               D ++  +
Sbjct: 136 MNFMDDRADLPERIEGTSQIVSEDTIFDHIRRKAKNFPNTSLKNQPVLHEDSFDTLEGTN 195

Query: 374 TKSSNTNFYLSADAKSNQVEKE 439
           +  +     + +D++  ++EKE
Sbjct: 196 SSEALKTTIVISDSEPKKMEKE 217


>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 56/159 (35%), Positives = 77/159 (48%), Gaps = 45/159 (28%)
 Frame = +2

Query: 2    SDEGELVVENNDDDDCKIITDRTIFDHLREKAKSLPFLAATPSN-EYPPSLETLSLIRKR 178
            S+EG   +E  +DD+CKIIT++T+F+H+R+K+KS  F   T SN    PS E L L RKR
Sbjct: 1663 SEEGSPAIET-EDDECKIITEQTVFEHIRKKSKS--FNVLTKSNASVSPSSEALILTRKR 1719

Query: 179  SHDRQLALNDTAEFLNLTEGS--------NPCEESSVLDGNTP----------------- 283
            +H++QL L+ T E L  TE S        +P   S   + N P                 
Sbjct: 1720 THEQQLELHVT-EALEETERSKIPRRAMVSPFLHSREAELNGPGISKNSTTKYQPATGSL 1778

Query: 284  -------------------SNMLTGETIFEHIRKKAKCF 343
                               S ++T  TIF+HIR+KAK F
Sbjct: 1779 VVMNFMDDRADLPERTESTSQIVTENTIFDHIRRKAKNF 1817


>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 2000

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 39/171 (22%)
 Frame = +2

Query: 5    DEGELVVENNDDDDCKIITDRTIFDHLREKAKSLPFLAATPSNEY-PPSLETLSLIRKRS 181
            +EG   VE  + D+ KI++++ IFDH+REKAK+ P    TPS     PSLET    RK  
Sbjct: 1665 EEGAPAVER-EKDNSKIVSEQEIFDHIREKAKNFPNF--TPSRTACSPSLETHLFTRKHR 1721

Query: 182  HDRQLALNDTAEFLNLTEGSNPCEES---------------------------------- 259
            H+  L L+   + + +TEGS   +++                                  
Sbjct: 1722 HENDLMLDGKPDAIEVTEGSKTSQQTVLNLTSEFREMEHNEHNIKSSPTLQPSTTARSLF 1781

Query: 260  --SVLDGNTPSNM--LTGETIFEHIRKKAKCFPRVDEIKSLSTKSSNTNFY 400
              ++++     NM  LT ETIF HIR+KA  FP + +IK   + +     Y
Sbjct: 1782 TMNLMEEKGGHNMRNLTEETIFGHIREKADNFPVLSKIKQSESPAWTMEHY 1832


>ref|XP_002298526.1| predicted protein [Populus trichocarpa] gi|222845784|gb|EEE83331.1|
            predicted protein [Populus trichocarpa]
          Length = 984

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 33/68 (48%), Positives = 45/68 (66%)
 Frame = +2

Query: 38   DDDCKIITDRTIFDHLREKAKSLPFLAATPSNEYPPSLETLSLIRKRSHDRQLALNDTAE 217
            DD CKII+++TIF+H+REKAK+ P L ++ SN   PS E + L RKRS D+ + L+    
Sbjct: 865  DDSCKIISEQTIFEHIREKAKNFPLLTSS-SNVCSPSSEAMLLTRKRSRDKAIELDSAPN 923

Query: 218  FLNLTEGS 241
                TEGS
Sbjct: 924  ATEETEGS 931


>emb|CAN83549.1| hypothetical protein VITISV_001171 [Vitis vinifera]
          Length = 1131

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 54/158 (34%), Positives = 76/158 (48%), Gaps = 45/158 (28%)
 Frame = +2

Query: 5    DEGELVVENNDDDDCKIITDRTIFDHLREKAKSLPFLAATPSN-EYPPSLETLSLIRKRS 181
            +EG   +E  +DD+CKIIT++T+F+H+R+K+KS  F   T SN    PS E L L RKR+
Sbjct: 811  EEGSPAIET-EDDECKIITEQTVFEHIRKKSKS--FNVLTKSNASVSPSSEALILTRKRT 867

Query: 182  HDRQLALNDTAEFLNLTEGS--------NPCEESSVLDGNTP------------------ 283
            H++QL L+ T E L  TE S        +P   S   + N P                  
Sbjct: 868  HEQQLELHVT-EALEETERSKIPRRAMVSPFLHSREAELNGPGISKNSTTKYQPATGSLV 926

Query: 284  ------------------SNMLTGETIFEHIRKKAKCF 343
                              S ++  +TIF+HIR+KAK F
Sbjct: 927  VMNFMDDRADLPERXEXTSQIVXEBTIFDHIRRKAKNF 964


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