BLASTX nr result

ID: Atractylodes21_contig00039017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039017
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like ...   105   4e-21
ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|2...   104   6e-21
ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyas...   101   5e-20
ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatu...   101   7e-20
ref|XP_002527245.1| lyase, putative [Ricinus communis] gi|223533...   100   9e-20

>ref|XP_003523772.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  105 bits (262), Expect = 4e-21
 Identities = 47/70 (67%), Positives = 57/70 (81%)
 Frame = -2

Query: 303 PLFSTGIIGGDNAIARHGIHGLYWLFNVDISGTNLNSNGENAVYLTQENGGTPFRGVMYD 124
           PLFS+G+IG DN+IARHGIHGLYWL+NVD+ GT L   G+N ++LTQ  G  PF+ +MYD
Sbjct: 569 PLFSSGLIGRDNSIARHGIHGLYWLYNVDMPGTQL-VEGDNTIFLTQTRGNGPFQAIMYD 627

Query: 123 YIRLEGPPPS 94
           YIRLEGPP S
Sbjct: 628 YIRLEGPPSS 637


>ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|222842838|gb|EEE80385.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  104 bits (260), Expect = 6e-21
 Identities = 48/74 (64%), Positives = 59/74 (79%)
 Frame = -2

Query: 303 PLFSTGIIGGDNAIARHGIHGLYWLFNVDISGTNLNSNGENAVYLTQENGGTPFRGVMYD 124
           PLFS+G+IG DN+IARHGIHGLYWL+ +D+ G  L   G+NAV+LTQ    +PF+G+MYD
Sbjct: 549 PLFSSGLIGKDNSIARHGIHGLYWLYGIDVPGARL-VEGDNAVFLTQPRSISPFQGIMYD 607

Query: 123 YIRLEGPPPSHSVS 82
           YIRLEGPP S S S
Sbjct: 608 YIRLEGPPSSSSNS 621


>ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  101 bits (252), Expect = 5e-20
 Identities = 46/70 (65%), Positives = 55/70 (78%)
 Frame = -2

Query: 303 PLFSTGIIGGDNAIARHGIHGLYWLFNVDISGTNLNSNGENAVYLTQENGGTPFRGVMYD 124
           PLFS+G+IG DN+IARHGIHGLYWL+NV I GT L   G+N ++LTQ  G  PF+ +MYD
Sbjct: 569 PLFSSGLIGRDNSIARHGIHGLYWLYNVGIPGTQL-VEGDNTIFLTQTRGNGPFQAIMYD 627

Query: 123 YIRLEGPPPS 94
           YIRLE PP S
Sbjct: 628 YIRLEAPPSS 637


>ref|XP_003603709.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355492757|gb|AES73960.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 651

 Score =  101 bits (251), Expect = 7e-20
 Identities = 45/72 (62%), Positives = 55/72 (76%)
 Frame = -2

Query: 309 NVPLFSTGIIGGDNAIARHGIHGLYWLFNVDISGTNLNSNGENAVYLTQENGGTPFRGVM 130
           N PLFS+G+IG DN+IARHGIHGLYWL+NV+I G+ L     N ++LTQ  G  PF+ +M
Sbjct: 570 NRPLFSSGLIGKDNSIARHGIHGLYWLYNVNIPGSLLVEGDNNTIFLTQARGNIPFQAIM 629

Query: 129 YDYIRLEGPPPS 94
           YDYIRLEGP  S
Sbjct: 630 YDYIRLEGPATS 641


>ref|XP_002527245.1| lyase, putative [Ricinus communis] gi|223533421|gb|EEF35171.1|
           lyase, putative [Ricinus communis]
          Length = 621

 Score =  100 bits (250), Expect = 9e-20
 Identities = 46/70 (65%), Positives = 55/70 (78%)
 Frame = -2

Query: 312 NNVPLFSTGIIGGDNAIARHGIHGLYWLFNVDISGTNLNSNGENAVYLTQENGGTPFRGV 133
           +N PLF+TG+IG DNAIARHGIHGLYWLF +++    L  +G+N +YLTQ     PFRGV
Sbjct: 550 SNRPLFTTGLIGTDNAIARHGIHGLYWLFTINVPSDQLR-DGKNIIYLTQARNDGPFRGV 608

Query: 132 MYDYIRLEGP 103
           MYDYIRLEGP
Sbjct: 609 MYDYIRLEGP 618


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