BLASTX nr result

ID: Atractylodes21_contig00039007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00039007
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containi...   197   1e-48
emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]   197   1e-48
ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|2...   191   1e-46
ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containi...   184   1e-44
ref|XP_002523058.1| pentatricopeptide repeat-containing protein,...   184   1e-44

>ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera] gi|296087974|emb|CBI35257.3| unnamed
           protein product [Vitis vinifera]
          Length = 503

 Score =  197 bits (502), Expect = 1e-48
 Identities = 88/142 (61%), Positives = 120/142 (84%)
 Frame = -1

Query: 426 MRSKAIIIWPKQVTSSLVEQLIRAERNVEKAVIVFDSASAEYANGFRHDHKTYGLIVSKL 247
           M SK +I W KQ+ S+ V QLI+AER+++KA+++FDSA+AEY NGFRH H+T+ L++S+L
Sbjct: 1   MGSKTVIKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRL 60

Query: 246 LSVNQFRRAEDFVDRMRKENCGVTEEILLSICRAYGRVHKPHDVMRIFQKMKEYECEPTL 67
           +S N FR AE+ + RM++E C +TE+I LSICRAYGRVHKP D +R+F+KMKEYECEP+ 
Sbjct: 61  VSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQ 120

Query: 66  KAYVTVFSILVDENQLKVALKF 1
           K+Y+TVF+ILV ENQLK+AL+F
Sbjct: 121 KSYITVFAILVGENQLKLALRF 142


>emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  197 bits (502), Expect = 1e-48
 Identities = 88/142 (61%), Positives = 120/142 (84%)
 Frame = -1

Query: 426 MRSKAIIIWPKQVTSSLVEQLIRAERNVEKAVIVFDSASAEYANGFRHDHKTYGLIVSKL 247
           M SK +I W KQ+ S+ V QLI+AER+++KA+++FDSA+AEY NGFRH H+T+ L++S+L
Sbjct: 1   MGSKTVIKWSKQIGSAQVAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRL 60

Query: 246 LSVNQFRRAEDFVDRMRKENCGVTEEILLSICRAYGRVHKPHDVMRIFQKMKEYECEPTL 67
           +S N FR AE+ + RM++E C +TE+I LSICRAYGRVHKP D +R+F+KMKEYECEP+ 
Sbjct: 61  VSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQ 120

Query: 66  KAYVTVFSILVDENQLKVALKF 1
           K+Y+TVF+ILV ENQLK+AL+F
Sbjct: 121 KSYITVFAILVGENQLKLALRF 142


>ref|XP_002329801.1| predicted protein [Populus trichocarpa] gi|222870863|gb|EEF07994.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  191 bits (485), Expect = 1e-46
 Identities = 86/142 (60%), Positives = 117/142 (82%)
 Frame = -1

Query: 426 MRSKAIIIWPKQVTSSLVEQLIRAERNVEKAVIVFDSASAEYANGFRHDHKTYGLIVSKL 247
           M  K ++ W KQ+T S VEQL+RAER++ KA I+FDSASAEY+NGFRHDH T+G+++SKL
Sbjct: 1   MGMKTLLKWSKQITPSKVEQLLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKL 60

Query: 246 LSVNQFRRAEDFVDRMRKENCGVTEEILLSICRAYGRVHKPHDVMRIFQKMKEYECEPTL 67
           +S N+FR AE+ ++RM++E C +TEEI LSICR YGRVH P D +R+F KM ++ C+PT 
Sbjct: 61  VSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTD 120

Query: 66  KAYVTVFSILVDENQLKVALKF 1
           K+Y++VF+ILV+ENQLKVA+ F
Sbjct: 121 KSYISVFAILVEENQLKVAMSF 142


>ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  184 bits (468), Expect = 1e-44
 Identities = 85/142 (59%), Positives = 115/142 (80%)
 Frame = -1

Query: 426 MRSKAIIIWPKQVTSSLVEQLIRAERNVEKAVIVFDSASAEYANGFRHDHKTYGLIVSKL 247
           M SK +  WPKQ+T+SLV QLI+AE++V KAV +FDSA+AEY NGFRHDH+T+GLI+S+L
Sbjct: 1   MGSKTLFKWPKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRL 60

Query: 246 LSVNQFRRAEDFVDRMRKENCGVTEEILLSICRAYGRVHKPHDVMRIFQKMKEYECEPTL 67
           ++VNQFR AE  ++RM++E C VTE+I LSICR YGRVH+P D +R+F KM+ ++  PT 
Sbjct: 61  VTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQ 120

Query: 66  KAYVTVFSILVDENQLKVALKF 1
           KAY+T+  ILV+EN +K A+ F
Sbjct: 121 KAYLTILDILVEENHVKRAIGF 142


>ref|XP_002523058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537620|gb|EEF39243.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 286

 Score =  184 bits (467), Expect = 1e-44
 Identities = 82/142 (57%), Positives = 117/142 (82%)
 Frame = -1

Query: 426 MRSKAIIIWPKQVTSSLVEQLIRAERNVEKAVIVFDSASAEYANGFRHDHKTYGLIVSKL 247
           M +K +  W K++T S VEQ+IRAE+++EKA +VFDSA+AEY++GF+HD+ T+  I+SKL
Sbjct: 1   MATKTLFKWSKKITPSQVEQVIRAEKDIEKAKLVFDSATAEYSHGFKHDNSTFSAIISKL 60

Query: 246 LSVNQFRRAEDFVDRMRKENCGVTEEILLSICRAYGRVHKPHDVMRIFQKMKEYECEPTL 67
           LS NQF   ED ++RM++E C +TE+I LSICRAYGRVH+P D +R+F KMK++EC+ T 
Sbjct: 61  LSANQFTLVEDMLNRMKQEKCNITEDIFLSICRAYGRVHRPLDSIRVFHKMKDFECKATQ 120

Query: 66  KAYVTVFSILVDENQLKVALKF 1
           K+Y+TVF+ILV+EN+LK A++F
Sbjct: 121 KSYITVFAILVEENRLKDAMRF 142


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