BLASTX nr result

ID: Atractylodes21_contig00038491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038491
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 prote...   138   7e-31
emb|CBI30076.3| unnamed protein product [Vitis vinifera]              138   7e-31
ref|NP_001154695.1| RNA-directed DNA polymerase (reverse transcr...   129   6e-28
emb|CAB85525.1| maturase-like protein [Arabidopsis thaliana]          129   6e-28
ref|XP_002533678.1| RNA binding protein, putative [Ricinus commu...   128   1e-27

>ref|XP_002274379.2| PREDICTED: putative COX1/OXI3 intron 2 protein-like [Vitis
           vinifera]
          Length = 757

 Score =  138 bits (348), Expect = 7e-31
 Identities = 65/108 (60%), Positives = 83/108 (76%), Gaps = 7/108 (6%)
 Frame = +3

Query: 3   MGDKNLADPKPVDGALTMALIRLASEEPSYRCGAHFCQRSDTVVYRIRLLQHK------- 161
           MGDKNL+DPKPVDGAL++ALIRLAS+EP+Y C AHFC R DT+VYR+RLLQ++       
Sbjct: 649 MGDKNLSDPKPVDGALSLALIRLASDEPAYSCVAHFCDRKDTIVYRVRLLQNRLNVNPLD 708

Query: 162 DLKSVSGMGVIHGVFDRKCVPLCPDHISELYTGALTLQDVDYSSLLQV 305
           + K V GMG IH   +RKC+PLC DHI +LY G ++LQD+D +S + V
Sbjct: 709 EKKWVPGMGAIHEGLNRKCLPLCSDHIHDLYMGTISLQDIDCTSFVDV 756


>emb|CBI30076.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  138 bits (348), Expect = 7e-31
 Identities = 65/108 (60%), Positives = 83/108 (76%), Gaps = 7/108 (6%)
 Frame = +3

Query: 3   MGDKNLADPKPVDGALTMALIRLASEEPSYRCGAHFCQRSDTVVYRIRLLQHK------- 161
           MGDKNL+DPKPVDGAL++ALIRLAS+EP+Y C AHFC R DT+VYR+RLLQ++       
Sbjct: 569 MGDKNLSDPKPVDGALSLALIRLASDEPAYSCVAHFCDRKDTIVYRVRLLQNRLNVNPLD 628

Query: 162 DLKSVSGMGVIHGVFDRKCVPLCPDHISELYTGALTLQDVDYSSLLQV 305
           + K V GMG IH   +RKC+PLC DHI +LY G ++LQD+D +S + V
Sbjct: 629 EKKWVPGMGAIHEGLNRKCLPLCSDHIHDLYMGTISLQDIDCTSFVDV 676


>ref|NP_001154695.1| RNA-directed DNA polymerase (reverse transcriptase) [Arabidopsis
           thaliana] gi|332003308|gb|AED90691.1| RNA-directed DNA
           polymerase (reverse transcriptase) [Arabidopsis
           thaliana]
          Length = 695

 Score =  129 bits (323), Expect = 6e-28
 Identities = 60/108 (55%), Positives = 80/108 (74%), Gaps = 7/108 (6%)
 Frame = +3

Query: 3   MGDKNLADPKPVDGALTMALIRLASEEPSYRCGAHFCQRSDTVVYRIRLLQHK------- 161
           MGDKNL+DPKPVDG L++ LIRLAS+EP + C A FC+RSDT+++R+ LLQ++       
Sbjct: 565 MGDKNLSDPKPVDGTLSLLLIRLASDEPLHHCAASFCERSDTIMHRVHLLQNRLHINPLD 624

Query: 162 DLKSVSGMGVIHGVFDRKCVPLCPDHISELYTGALTLQDVDYSSLLQV 305
           + K V GMG IH   +RKC+PLC  HIS++Y G +TLQDVD SS + +
Sbjct: 625 EEKWVPGMGTIHSALNRKCLPLCSTHISDVYLGKITLQDVDSSSFIDL 672


>emb|CAB85525.1| maturase-like protein [Arabidopsis thaliana]
          Length = 696

 Score =  129 bits (323), Expect = 6e-28
 Identities = 60/108 (55%), Positives = 80/108 (74%), Gaps = 7/108 (6%)
 Frame = +3

Query: 3   MGDKNLADPKPVDGALTMALIRLASEEPSYRCGAHFCQRSDTVVYRIRLLQHK------- 161
           MGDKNL+DPKPVDG L++ LIRLAS+EP + C A FC+RSDT+++R+ LLQ++       
Sbjct: 588 MGDKNLSDPKPVDGTLSLLLIRLASDEPLHHCAASFCERSDTIMHRVHLLQNRLHINPLD 647

Query: 162 DLKSVSGMGVIHGVFDRKCVPLCPDHISELYTGALTLQDVDYSSLLQV 305
           + K V GMG IH   +RKC+PLC  HIS++Y G +TLQDVD SS + +
Sbjct: 648 EEKWVPGMGTIHSALNRKCLPLCSTHISDVYLGKITLQDVDSSSFIDL 695


>ref|XP_002533678.1| RNA binding protein, putative [Ricinus communis]
           gi|223526429|gb|EEF28708.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 751

 Score =  128 bits (321), Expect = 1e-27
 Identities = 61/108 (56%), Positives = 78/108 (72%), Gaps = 7/108 (6%)
 Frame = +3

Query: 3   MGDKNLADPKPVDGALTMALIRLASEEPSYRCGAHFCQRSDTVVYRIRLLQH-------K 161
           MGDKNL+DPKPVDGAL++  IRLA  EPS+ C AHFC R+DT++YR+RLLQ+       +
Sbjct: 643 MGDKNLSDPKPVDGALSLVFIRLAVNEPSHSCVAHFCNRTDTIMYRVRLLQNLLNLSPTR 702

Query: 162 DLKSVSGMGVIHGVFDRKCVPLCPDHISELYTGALTLQDVDYSSLLQV 305
            +  + GM  IH   DR C+PLC  HIS+LYTG +TLQD+D +S L V
Sbjct: 703 GVNWIPGMITIHECIDRTCLPLCSVHISDLYTGKITLQDIDCTSFLHV 750


Top