BLASTX nr result

ID: Atractylodes21_contig00038450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038450
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEH95574.1| translational transactivator [Blueberry red rings...    56   3e-06

>gb|AEH95574.1| translational transactivator [Blueberry red ringspot virus]
          Length = 427

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/81 (35%), Positives = 45/81 (55%)
 Frame = -3

Query: 247 YQLFCYTEAEAMQIWEYFSQGLIDTIYTEKEFLGRLLELPTKIQLVFRQYHERVAKDKQV 68
           Y+     EA A+ I+E F  GL DTIY     +    + P +I+     Y +R AK++  
Sbjct: 206 YKAIILPEASALTIYELFKNGLADTIYFSDSKVFN--DFPERIKQTINNYFKRFAKERPC 263

Query: 67  YLKLYSSYPFFTENGEVLVPS 5
           Y+KL+S++P F+  GE  +PS
Sbjct: 264 YIKLFSTHPTFSIQGEEDMPS 284


Top