BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038406
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arab...   175   4e-42
ref|NP_194257.1| pentatricopeptide repeat-containing protein [Ar...   172   3e-41
ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37

>ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic [Vitis vinifera]
           gi|296084180|emb|CBI24568.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  176 bits (445), Expect = 2e-42
 Identities = 82/116 (70%), Positives = 97/116 (83%)
 Frame = -3

Query: 369 ERLFSAMTEKYGIVPSMEHYACLVNLYGRAGLIVEAYKVIMEKMQFAAGPTVWGALLHAC 190
           E LFS M E YG++PSMEHYAC+VNLYGRAGLI EAY++I ++M+F AGPTVWGALL+AC
Sbjct: 398 EGLFSMMREDYGMIPSMEHYACMVNLYGRAGLIEEAYEIIEKRMEFEAGPTVWGALLYAC 457

Query: 189 QVHGNVEIGEIAAENLFELEPDNNHNFKLLMQIYGKAGRVQDVERVRLMMVSRGFD 22
             H NV+IG+IAAE LFELEPDN HNF+LLM IY   GR++DVE+VR MM  RGFD
Sbjct: 458 YFHHNVDIGKIAAECLFELEPDNEHNFELLMNIYRNVGRLEDVEKVRKMMADRGFD 513


>ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
           lyrata] gi|297313453|gb|EFH43876.1| hypothetical protein
           ARALYDRAFT_354257 [Arabidopsis lyrata subsp. lyrata]
          Length = 758

 Score =  175 bits (443), Expect = 4e-42
 Identities = 78/116 (67%), Positives = 100/116 (86%)
 Frame = -3

Query: 369 ERLFSAMTEKYGIVPSMEHYACLVNLYGRAGLIVEAYKVIMEKMQFAAGPTVWGALLHAC 190
           ERLFS M+++YGI P MEHYAC+VNLYGRAG++ EAY +I+++M+F AGPTVWGALL+AC
Sbjct: 642 ERLFSLMSKEYGINPKMEHYACMVNLYGRAGMMEEAYSMIVQEMEFEAGPTVWGALLYAC 701

Query: 189 QVHGNVEIGEIAAENLFELEPDNNHNFKLLMQIYGKAGRVQDVERVRLMMVSRGFD 22
            +HGN +IGE++A+ LFELEPDN HNF+LLM+IY KA R +DVERVR M+V RG +
Sbjct: 702 YLHGNTDIGEVSAQRLFELEPDNEHNFELLMRIYSKAKRAEDVERVRQMLVDRGLE 757


>ref|NP_194257.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75265547|sp|Q9SB36.1|PP337_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g25270, chloroplastic; Flags: Precursor
           gi|4454015|emb|CAA23068.1| putative protein [Arabidopsis
           thaliana] gi|7269378|emb|CAB81338.1| putative protein
           [Arabidopsis thaliana] gi|332659633|gb|AEE85033.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 527

 Score =  172 bits (435), Expect = 3e-41
 Identities = 78/116 (67%), Positives = 98/116 (84%)
 Frame = -3

Query: 369 ERLFSAMTEKYGIVPSMEHYACLVNLYGRAGLIVEAYKVIMEKMQFAAGPTVWGALLHAC 190
           ERLFS M+++YGI P MEHYAC+VNLYGRAG++ EAY +I+++M   AGPTVWGALL+AC
Sbjct: 411 ERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYAC 470

Query: 189 QVHGNVEIGEIAAENLFELEPDNNHNFKLLMQIYGKAGRVQDVERVRLMMVSRGFD 22
            +HGN +IGE+AA+ LFELEPDN HNF+LL++IY KA R +DVERVR MMV RG +
Sbjct: 471 YLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526


>ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|222869403|gb|EEF06534.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  167 bits (423), Expect = 8e-40
 Identities = 79/114 (69%), Positives = 94/114 (82%)
 Frame = -3

Query: 369 ERLFSAMTEKYGIVPSMEHYACLVNLYGRAGLIVEAYKVIMEKMQFAAGPTVWGALLHAC 190
           ERLFS M  KY I P MEHYAC+VNLYGRAGLI EAY +I ++M+F AGPTVWGALL++C
Sbjct: 328 ERLFSLMKAKYQINPIMEHYACMVNLYGRAGLINEAYAIIRDQMEFEAGPTVWGALLYSC 387

Query: 189 QVHGNVEIGEIAAENLFELEPDNNHNFKLLMQIYGKAGRVQDVERVRLMMVSRG 28
            +H NV+ GEIAA+ LF+LEPDN HNF+LLM+IY  AGR++D ERVR MMV RG
Sbjct: 388 YLHRNVDTGEIAAQYLFDLEPDNEHNFELLMKIYDNAGRLEDAERVRKMMVDRG 441


>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  158 bits (400), Expect = 4e-37
 Identities = 73/115 (63%), Positives = 93/115 (80%)
 Frame = -3

Query: 366 RLFSAMTEKYGIVPSMEHYACLVNLYGRAGLIVEAYKVIMEKMQFAAGPTVWGALLHACQ 187
           +L+  M  KYGI P++EHYAC+VNLYGRAG+I EAYK+I + M+  AGPT+WGALL+AC 
Sbjct: 374 KLYFLMKGKYGIRPTIEHYACMVNLYGRAGMIEEAYKIITKGMEIEAGPTIWGALLYACY 433

Query: 186 VHGNVEIGEIAAENLFELEPDNNHNFKLLMQIYGKAGRVQDVERVRLMMVSRGFD 22
           +H +V+I EIAAE LFELEPDN  NF+LLM+IYG AGR +D +RV+LMM  RG +
Sbjct: 434 LHSDVDIAEIAAERLFELEPDNELNFELLMKIYGNAGRSEDEKRVKLMMAERGLN 488