BLASTX nr result

ID: Atractylodes21_contig00038376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038376
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box pro...    84   1e-14
emb|CBI20286.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002461442.1| hypothetical protein SORBIDRAFT_02g002773 [S...    81   9e-14
ref|XP_003561416.1| PREDICTED: uncharacterized protein LOC100838...    79   5e-13
ref|XP_002511355.1| ubiquitin-protein ligase, putative [Ricinus ...    75   5e-12

>ref|XP_004138258.1| PREDICTED: putative FBD-associated F-box protein At5g56700-like
           [Cucumis sativus] gi|449501454|ref|XP_004161371.1|
           PREDICTED: putative FBD-associated F-box protein
           At5g56700-like [Cucumis sativus]
          Length = 475

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 47/125 (37%), Positives = 73/125 (58%), Gaps = 1/125 (0%)
 Frame = +3

Query: 114 IDYISQLSDELLLIILSFLPIKDAVVTSGLSKRWSSLWYELEQLNFDG-SDMLDKMAKDR 290
           +D IS L  ++L+ ILS LP+K+A  TS LS +W  LW  +  LNFD    +LD    D 
Sbjct: 44  VDSISHLPQDILVFILSLLPLKEAARTSTLSHKWRCLWSFIPCLNFDAHKKLLDLQFTDE 103

Query: 291 KLCDSMRAKYIEQVNGVLKNYYCHKLREFRIRFDLGERHKSDIDTWLKDAVYMRVETLEL 470
            L  S R ++++ VN V+ +Y    L   RIRF+L    + D+D W++ A+  +++  EL
Sbjct: 104 NL-KSERRQFVKWVNRVIDSYKGSNLETLRIRFNLDSSFQCDVDRWVQFAMQWKLKMFEL 162

Query: 471 DLMES 485
           +L +S
Sbjct: 163 NLSDS 167


>emb|CBI20286.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 59/161 (36%), Positives = 82/161 (50%), Gaps = 21/161 (13%)
 Frame = +3

Query: 117 DYISQLSDELLLIILSFLPIKDAVVTSGLSKRWSSLWYELEQLNFDG----------SDM 266
           D +S+L DE+L+ ILS L +++A  TS LS+RW  LW    +LNFD           S  
Sbjct: 22  DLLSELPDEILISILSRLTLREAAATSVLSQRWRYLWTYTSRLNFDSVVNKIVRRSHSFA 81

Query: 267 LDKMAKDRKLCDSMRAKYIEQVNGVLKNYY-CHKLREFRIRFDLGERHKSDIDTWLKDAV 443
           L   A  R+     R KYI+ V+ VL  Y     L EFR+ FDL +R +SDID W + A+
Sbjct: 82  LSTAAGRRR----RRRKYIKWVHKVLAKYRGGRNLDEFRVCFDLSKRSRSDIDKWFEFAM 137

Query: 444 YMRVETLELDLM-----ESGQDVWNP-----EESYKFPIKL 536
              V+ LE D +        +D W       +  YKFP ++
Sbjct: 138 SKNVKNLEFDFLRCSSQNQDRDPWFVMLSYFQNFYKFPHRI 178


>ref|XP_002461442.1| hypothetical protein SORBIDRAFT_02g002773 [Sorghum bicolor]
           gi|241924819|gb|EER97963.1| hypothetical protein
           SORBIDRAFT_02g002773 [Sorghum bicolor]
          Length = 256

 Score = 81.3 bits (199), Expect = 9e-14
 Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
 Frame = +3

Query: 117 DYISQLSDELLLIILSFLPIKDAVVTSGLSKRWSSLWYELEQLNFD----GSDMLDKMAK 284
           D IS L D +L+ ILS + +++A VT  LS RW  LW  ++ L  D    G  +      
Sbjct: 35  DRISSLPDGILINILSLMTVREAAVTDVLSTRWRHLWESVDHLILDMHTFGMQVPPNSDN 94

Query: 285 DRKL--CDSMRAKYIEQVNGVLKNYYCHKLREFRIRFDLGERHKSDIDTWLKDAVYMRVE 458
              L   +S    ++ +VN +L ++  +KL+EF++ F L   H S++D W+  AV    E
Sbjct: 95  HGNLDFSNSEATTFVRKVNELLSHHKGNKLKEFKVEFPLSSAHASELDRWVAFAVASHAE 154

Query: 459 TLELDLM-ESGQDVWNPEESYKFPIK 533
           TL L L  E G+   +  E+Y FP+K
Sbjct: 155 TLTLSLCDEHGRIAIDHREAYFFPLK 180


>ref|XP_003561416.1| PREDICTED: uncharacterized protein LOC100838353 [Brachypodium
           distachyon]
          Length = 497

 Score = 79.0 bits (193), Expect = 5e-13
 Identities = 48/146 (32%), Positives = 86/146 (58%), Gaps = 8/146 (5%)
 Frame = +3

Query: 123 ISQLSDELLLIILSFLPIKDAVVTSGLSKRWSSLWYELEQLNFDGSDMLDKMAKDRKLCD 302
           +S L  ++L  +LS LP+++AV TS LS +W  +W     LNF+   ++ ++A   +  +
Sbjct: 26  LSDLPMDVLCSVLSQLPMEEAVKTSILSCQWKYIWCHQTSLNFNCKTIMPRVAWSTR--E 83

Query: 303 SMRAKYIEQVNGVLKNYYCHKLREFRIRFDLGERHKSDIDTWLKDAVYMRVETLELDL-M 479
           ++R ++I++VN VL+      + +  IRFDL +RH +D+D W+  A+  + + L L+L +
Sbjct: 84  AVRQEFIKRVNAVLRQRNGAGVEKMNIRFDLDDRHAADVDRWVNLAIASKTKVLTLELWL 143

Query: 480 ESGQDVW-----NPE--ESYKFPIKL 536
           +S   V+     +PE  E Y FP +L
Sbjct: 144 DSPAIVYRLRVSDPERMEPYNFPFQL 169


>ref|XP_002511355.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223550470|gb|EEF51957.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 457

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
 Frame = +3

Query: 117 DYISQLSDELLLIILSFLPIKDAVVTSGLSKRWSSLWYELEQLNFDGSDM-LDKMAKDRK 293
           D IS L +E+L  ILSFL  ++A  TS LS+RW  LW     LNFD + + L K   DR 
Sbjct: 19  DRISHLPEEILTSILSFLTTEEASRTSVLSRRWRILWTLTSSLNFDCTKIALGKKLDDRF 78

Query: 294 LCDSMRAKYIEQVNGVLKNYYCHKLREFRIRFDLGERHKSDIDTWLKDAVYMRVETLELD 473
              S R ++   V  VL+ Y    L EF + FDL    +  +D W+  A+   ++ LE+ 
Sbjct: 79  ALRSERTRFAMWVKRVLEVYKDSNLDEFIVSFDLTCNSRRSLDKWMNFAMSKTLKRLEIS 138

Query: 474 LME-SGQDVWNPEESYKFPI 530
           L   S +     +E Y FP+
Sbjct: 139 LAPFSSRKFRFHDECYSFPV 158


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