BLASTX nr result

ID: Atractylodes21_contig00038360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038360
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]   182   3e-44
emb|CBI16093.3| unnamed protein product [Vitis vinifera]              181   4e-44
ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containi...   181   4e-44
ref|XP_002298341.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002520533.1| pentatricopeptide repeat-containing protein,...   166   2e-39

>emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  182 bits (461), Expect = 3e-44
 Identities = 86/130 (66%), Positives = 103/130 (79%)
 Frame = -1

Query: 394  SGMIELGKNLFLFMQEKFKIQPRLEHYACMVHLLGHEGKLSEAYDLIREMPIEPDSFVWG 215
            +GM+ELG++LF  MQEK++I+PRLEHYACMV LLG  GKLSEAYDLI+ MP+EPD FVWG
Sbjct: 1189 AGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWG 1248

Query: 214  ALLGACKLHGNVGLAEIAVKRVAELEPESAGSSLLLSNLYADAGSWGYAARVKRTXXXXX 35
            ALLGAC+ HGN+ LAE+A + + ELEPES GSSLLLSNLYADAG WG AA++K+      
Sbjct: 1249 ALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRK 1308

Query: 34   XXXLAGSSWI 5
                 G SWI
Sbjct: 1309 FGKFPGCSWI 1318



 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/130 (34%), Positives = 73/130 (56%)
 Frame = -1

Query: 394 SGMIELGKNLFLFMQEKFKIQPRLEHYACMVHLLGHEGKLSEAYDLIREMPIEPDSFVWG 215
           SG+++ G+  F  M + + IQP   H +CMV +LG  G+L  A D I+++ ++P + +W 
Sbjct: 531 SGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWR 590

Query: 214 ALLGACKLHGNVGLAEIAVKRVAELEPESAGSSLLLSNLYADAGSWGYAARVKRTXXXXX 35
            LL AC+ + N+ +AE   +++ +LEP  A   + LSN+YA+ G W  A   +R      
Sbjct: 591 PLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKE 650

Query: 34  XXXLAGSSWI 5
                G SWI
Sbjct: 651 ISKEPGCSWI 660


>emb|CBI16093.3| unnamed protein product [Vitis vinifera]
          Length = 702

 Score =  181 bits (460), Expect = 4e-44
 Identities = 86/130 (66%), Positives = 103/130 (79%)
 Frame = -1

Query: 394 SGMIELGKNLFLFMQEKFKIQPRLEHYACMVHLLGHEGKLSEAYDLIREMPIEPDSFVWG 215
           +GM+ELG++LF  MQEK++I+PRLEHYACMV LLG  GKLSEAYDLI+ MP+EPD FVWG
Sbjct: 570 AGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWG 629

Query: 214 ALLGACKLHGNVGLAEIAVKRVAELEPESAGSSLLLSNLYADAGSWGYAARVKRTXXXXX 35
           ALLGAC+ HGN+ LAE+A + + ELEPES GSSLLLSNLYADAG WG AA++K+      
Sbjct: 630 ALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRK 689

Query: 34  XXXLAGSSWI 5
                G SWI
Sbjct: 690 FGKFPGCSWI 699


>ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Vitis vinifera]
          Length = 545

 Score =  181 bits (460), Expect = 4e-44
 Identities = 86/130 (66%), Positives = 103/130 (79%)
 Frame = -1

Query: 394 SGMIELGKNLFLFMQEKFKIQPRLEHYACMVHLLGHEGKLSEAYDLIREMPIEPDSFVWG 215
           +GM+ELG++LF  MQEK++I+PRLEHYACMV LLG  GKLSEAYDLI+ MP+EPD FVWG
Sbjct: 413 AGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWG 472

Query: 214 ALLGACKLHGNVGLAEIAVKRVAELEPESAGSSLLLSNLYADAGSWGYAARVKRTXXXXX 35
           ALLGAC+ HGN+ LAE+A + + ELEPES GSSLLLSNLYADAG WG AA++K+      
Sbjct: 473 ALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRK 532

Query: 34  XXXLAGSSWI 5
                G SWI
Sbjct: 533 FGKFPGCSWI 542


>ref|XP_002298341.1| predicted protein [Populus trichocarpa] gi|222845599|gb|EEE83146.1|
           predicted protein [Populus trichocarpa]
          Length = 429

 Score =  172 bits (436), Expect = 3e-41
 Identities = 78/130 (60%), Positives = 103/130 (79%)
 Frame = -1

Query: 394 SGMIELGKNLFLFMQEKFKIQPRLEHYACMVHLLGHEGKLSEAYDLIREMPIEPDSFVWG 215
           +GM+E G++LFL MQ+K+KI PRLEHYACMV LLG  G L+EAYD+I++MP++PD FVWG
Sbjct: 296 AGMVEHGQSLFLLMQQKYKIVPRLEHYACMVDLLGRAGNLNEAYDMIKKMPVKPDLFVWG 355

Query: 214 ALLGACKLHGNVGLAEIAVKRVAELEPESAGSSLLLSNLYADAGSWGYAARVKRTXXXXX 35
           ALLGAC+ HG++GLAE+A + +AELEPE+AG+++L+SNLYADAGSW   +R K+      
Sbjct: 356 ALLGACRNHGDIGLAEVAARHLAELEPENAGNNMLMSNLYADAGSWENVSRSKKMMKRKR 415

Query: 34  XXXLAGSSWI 5
                G SWI
Sbjct: 416 LKNFPGCSWI 425


>ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540375|gb|EEF41946.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 547

 Score =  166 bits (419), Expect = 2e-39
 Identities = 75/111 (67%), Positives = 94/111 (84%)
 Frame = -1

Query: 388 MIELGKNLFLFMQEKFKIQPRLEHYACMVHLLGHEGKLSEAYDLIREMPIEPDSFVWGAL 209
           ++ELG++LFL M EK+KI PRLEHYACM+ LLG  GKLSEAYD+I+ MP+EPD FVWGAL
Sbjct: 418 LVELGQSLFLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMPVEPDLFVWGAL 477

Query: 208 LGACKLHGNVGLAEIAVKRVAELEPESAGSSLLLSNLYADAGSWGYAARVK 56
           LGAC+ HG + LAEIA + +AELEP +AG+++LLSNLYADAGSW   A++K
Sbjct: 478 LGACRQHGEIDLAEIAARHLAELEPRNAGNNMLLSNLYADAGSWENVAKLK 528


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