BLASTX nr result

ID: Atractylodes21_contig00038347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038347
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP73234.1| CST complex subunit CTC1-like protein, partial [C...   112   3e-23
ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi...   111   7e-23
emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]   110   9e-23
ref|XP_002510276.1| conserved hypothetical protein [Ricinus comm...   105   4e-21
ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu...    99   5e-19

>gb|AFP73234.1| CST complex subunit CTC1-like protein, partial [Carica papaya]
          Length = 409

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/118 (46%), Positives = 77/118 (65%), Gaps = 7/118 (5%)
 Frame = +3

Query: 6   VPCTANKSGTR-------NLNGFLAEITICECKLCCSKDRPMSLQDITGEQNGGHNFSKS 164
           VPC+  KS          N+ GFL  I  CEC LC S++    L D T      H+F+K 
Sbjct: 196 VPCSFGKSNKVGDSSAPVNIRGFLVRIIACECNLCASRELMAVLHDSTFR----HSFTKP 251

Query: 165 KILYFCGSASIWYPAISRLVGGVVLISGMKKKMVFLGEGKSLMMYVTTEKAMIHLPMS 338
             +YFCGSAS W+P I++LVGGVVL+S +KKK++F+G+ +S +M+VTTE +++HLP S
Sbjct: 252 LFIYFCGSASCWHPVITKLVGGVVLLSRLKKKLIFMGKDESQLMFVTTENSILHLPSS 309


>ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera]
          Length = 1215

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/105 (51%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
 Frame = +3

Query: 21  NKSGTRNLNGFLAEITICECKLCCSKDRPMSLQDITGEQNG--GHNFSKSKILYFCGSAS 194
           N S   NL GFLA+I +CEC+LCCSK+  MSL D    + G  GH F+K +ILYFCGS S
Sbjct: 229 NFSTPSNLRGFLAQIMVCECELCCSKEGLMSLDD---PRKGLRGHCFTKPQILYFCGSGS 285

Query: 195 IWYPAISRLVGGVVLISGMKKKMVFLGEGKSLMMYVTTEKAMIHL 329
            W+P  ++L+G V+ IS +KKK+VF+G+ +S +MYVTT K ++ +
Sbjct: 286 SWHPLFTKLIGNVICISHLKKKLVFIGKEESQLMYVTTGKTVLRV 330


>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/105 (51%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
 Frame = +3

Query: 21  NKSGTRNLNGFLAEITICECKLCCSKDRPMSLQDITGEQNG--GHNFSKSKILYFCGSAS 194
           N S   NL GFLA+I +CEC+LCCSK+  MSL D    + G  GH F+K +ILYFCGS S
Sbjct: 371 NFSTPSNLRGFLAQIMVCECELCCSKEVLMSLDD---PRKGLRGHCFTKPQILYFCGSGS 427

Query: 195 IWYPAISRLVGGVVLISGMKKKMVFLGEGKSLMMYVTTEKAMIHL 329
            W+P  ++L+G V+ IS +KKK+VF+G+ +S +MYVTT K ++ +
Sbjct: 428 SWHPLFTKLIGNVICISHLKKKLVFIGKEESQLMYVTTGKTVLRV 472


>ref|XP_002510276.1| conserved hypothetical protein [Ricinus communis]
           gi|223550977|gb|EEF52463.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1159

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/109 (45%), Positives = 76/109 (69%)
 Frame = +3

Query: 6   VPCTANKSGTRNLNGFLAEITICECKLCCSKDRPMSLQDITGEQNGGHNFSKSKILYFCG 185
           VPC+   + ++NL GF+A+I +CECKLC SK+ P+  +  T      H F+K   +YF G
Sbjct: 192 VPCSVGANKSKNLRGFIAQIRVCECKLCISKE-PIKPEQQT------HVFTKPSFVYFFG 244

Query: 186 SASIWYPAISRLVGGVVLISGMKKKMVFLGEGKSLMMYVTTEKAMIHLP 332
           S+  W+P I++LV  VV +SG+KKK+VF+G+ +S +M+V TE ++IHLP
Sbjct: 245 SSMSWHPVITKLVRKVVTLSGLKKKLVFIGKEESQLMFVITENSVIHLP 293


>ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1362

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 13/121 (10%)
 Frame = +3

Query: 6   VPCTANKSG------------TRNLNGFLAEITICECKLCCSKDRPMSLQDITGEQNGGH 149
           VPCT  +              ++ L GF+A I ICEC+ C SK+ PMSL D +  +   H
Sbjct: 198 VPCTLGQRNLQINGKSDSSAVSKKLRGFMAHIMICECRSCTSKE-PMSLPDNSVRELNTH 256

Query: 150 NFSKSKILYFCGSASIWYPAISRLVG-GVVLISGMKKKMVFLGEGKSLMMYVTTEKAMIH 326
           +F    I+Y CGSAS W+P +S+ VG G +   G+KKK+V +G+ +S +MYVT+EK+ +H
Sbjct: 257 SFVNPTIVYLCGSASSWHPVLSKFVGLGFINFWGLKKKLVSIGKAESCLMYVTSEKSSLH 316

Query: 327 L 329
           L
Sbjct: 317 L 317


Top