BLASTX nr result

ID: Atractylodes21_contig00038285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038285
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-...    88   8e-16
ref|XP_004156229.1| PREDICTED: tryptophan synthase beta chain 2-...    87   1e-15
ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-...    87   2e-15
ref|XP_004141606.1| PREDICTED: tryptophan synthase beta chain 2-...    84   9e-15
ref|XP_002531484.1| tryptophan synthase beta chain, putative [Ri...    75   7e-12

>ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/79 (50%), Positives = 54/79 (68%)
 Frame = +1

Query: 73  GKKNHGLLLFDAKPNHLKFSFRDKAKAAMSLSPHAVATEIPTHWYNIIADLPIKPPPSLH 252
           G++  G L     P HL+FS   + KAA +  P+  A E+P  WYN++ADLP+KPPP LH
Sbjct: 6   GEQLPGCLSLKRVPAHLRFSNGYRTKAASN--PNLKAVEVPRQWYNLVADLPVKPPPPLH 63

Query: 253 PKTFAPLQPQDLSHLLADE 309
           PKT+ P++P+DLSHL  DE
Sbjct: 64  PKTYEPIKPEDLSHLFPDE 82


>ref|XP_004156229.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 599

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/105 (44%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
 Frame = +1

Query: 4   LFSATMPPSLSVNPNPSFSF---QGEGKKNHGLLLFDAKPNHLKFSFRDKAKAAMSLSPH 174
           L  +T   SL  N + S+ F   + + K+  G L     P HL+FS   + KAA +  P+
Sbjct: 97  LHQSTAFLSLVSNLDRSWQFYINKADNKQLPGRLSLKRTPRHLRFSNGYRTKAASN--PN 154

Query: 175 AVATEIPTHWYNIIADLPIKPPPSLHPKTFAPLQPQDLSHLLADE 309
             + E+P  WYN++ADLP+KPPP LH KT  PL+P+DLSHL ADE
Sbjct: 155 LKSVEVPRQWYNLVADLPVKPPPPLHSKTLEPLKPEDLSHLYADE 199


>ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/79 (49%), Positives = 54/79 (68%)
 Frame = +1

Query: 73  GKKNHGLLLFDAKPNHLKFSFRDKAKAAMSLSPHAVATEIPTHWYNIIADLPIKPPPSLH 252
           G++  G L     P HL+FS   + KAA +  P+  + E+P  WYN++ADLP+KPPP LH
Sbjct: 6   GEQLPGCLSLKRVPAHLRFSNGYRTKAASN--PNLKSVEVPRQWYNLVADLPVKPPPPLH 63

Query: 253 PKTFAPLQPQDLSHLLADE 309
           PKT+ P++P+DLSHL  DE
Sbjct: 64  PKTYEPIKPEDLSHLFPDE 82


>ref|XP_004141606.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 600

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/82 (47%), Positives = 53/82 (64%)
 Frame = +1

Query: 64  QGEGKKNHGLLLFDAKPNHLKFSFRDKAKAAMSLSPHAVATEIPTHWYNIIADLPIKPPP 243
           + + K+  G       P HL+FS   + KAA +  P+  + E+P  WYN++ADLP+KPPP
Sbjct: 121 KADNKQLPGRFSLKRTPRHLRFSNGYRTKAASN--PNLKSVEVPRQWYNLVADLPVKPPP 178

Query: 244 SLHPKTFAPLQPQDLSHLLADE 309
            LH KT  PL+P+DLSHL ADE
Sbjct: 179 PLHSKTLEPLKPEDLSHLYADE 200


>ref|XP_002531484.1| tryptophan synthase beta chain, putative [Ricinus communis]
           gi|223528911|gb|EEF30908.1| tryptophan synthase beta
           chain, putative [Ricinus communis]
          Length = 212

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/100 (39%), Positives = 59/100 (59%)
 Frame = +1

Query: 10  SATMPPSLSVNPNPSFSFQGEGKKNHGLLLFDAKPNHLKFSFRDKAKAAMSLSPHAVATE 189
           S T     +++       QG+ K   G  L + K +  KFS   +A+A  SL+    A +
Sbjct: 5   SHTSATPFAISKPTDICIQGKEKWLGGFAL-NTKSSPSKFSNGLRARAKASLNADQKAIQ 63

Query: 190 IPTHWYNIIADLPIKPPPSLHPKTFAPLQPQDLSHLLADE 309
           IP  WYN+++DLP+KPPP+L+PKT  P++P+DL+ L  DE
Sbjct: 64  IPRQWYNLVSDLPVKPPPALNPKTHEPVKPEDLAPLFPDE 103


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