BLASTX nr result
ID: Atractylodes21_contig00038280
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00038280
(389 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,... 130 1e-28
ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi... 124 6e-27
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ... 121 5e-26
ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ... 118 6e-25
ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2... 103 1e-20
>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1016
Score = 130 bits (327), Expect = 1e-28
Identities = 73/129 (56%), Positives = 84/129 (65%)
Frame = +2
Query: 2 LALDLLRDTSFGECDVVSYNTVIWGFCKYGFAEQGFGLSSEMIKKGFTFDDYTRNILVKG 181
LALDLLR+ E D V+YNTVIWGFC++G Q FG S M+KK FD T NILVKG
Sbjct: 63 LALDLLRNVDV-EVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKG 121
Query: 182 FIDTGLWGYLEWILDQFSHKGSAYVDVVGFNTLIHGYSKAGNANAALELLYRMRKEESFP 361
F GL Y E I+D G DV+GFNTLI GY KAG + AL+L+ RMRKE
Sbjct: 122 FCRIGLAKYGERIMDNLV-SGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLS 180
Query: 362 DIVTYNTLI 388
DIV+YNTLI
Sbjct: 181 DIVSYNTLI 189
Score = 62.4 bits (150), Expect = 4e-08
Identities = 34/115 (29%), Positives = 57/115 (49%)
Frame = +2
Query: 44 DVVSYNTVIWGFCKYGFAEQGFGLSSEMIKKGFTFDDYTRNILVKGFIDTGLWGYLEWIL 223
D V+YN +I G+C+ ++ ++M+ +G + + T N+L+ G + GL + +
Sbjct: 726 DTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELF 785
Query: 224 DQFSHKGSAYVDVVGFNTLIHGYSKAGNANAALELLYRMRKEESFPDIVTYNTLI 388
D+ G D ++TLI GY K GN ++ L M + P TYN LI
Sbjct: 786 DKMKENG-LNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTSTYNVLI 839
Score = 55.5 bits (132), Expect = 4e-06
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Frame = +2
Query: 5 ALDLLRD-TSFGEC-DVVSYNTVIWGFCKYGFAEQGFGLSSEMIKKGFTFDDYTRNILVK 178
A +LL+D TS G D V+Y +++ GF K G + EM +K FD T N+L+
Sbjct: 502 AEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLIN 561
Query: 179 GFIDTGLWGYLEWILDQFSHKGSAYVDVVGFNTLIHGYSKAGNANAALELLYRMRKEESF 358
G ++ G + + + G A + +N +I Y K G + ALEL M+ +
Sbjct: 562 GLLEHGKY-EAKSVYSGMIEMGLA-PNQATYNIMIKAYCKQGELDNALELWNEMKSHKIM 619
Query: 359 PDIVTYNTLI 388
P +T NTL+
Sbjct: 620 PSSITCNTLV 629
>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Glycine max]
Length = 1012
Score = 124 bits (312), Expect = 6e-27
Identities = 67/129 (51%), Positives = 83/129 (64%)
Frame = +2
Query: 2 LALDLLRDTSFGECDVVSYNTVIWGFCKYGFAEQGFGLSSEMIKKGFTFDDYTRNILVKG 181
LAL LR++ F D V+YNTV+WGFCK G A+QGFGL SEM+KKG FD T NILVKG
Sbjct: 63 LALGYLRNSVF---DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKG 119
Query: 182 FIDTGLWGYLEWILDQFSHKGSAYVDVVGFNTLIHGYSKAGNANAALELLYRMRKEESFP 361
+ GL Y EWI+ G +D +G NTL+ GY + G + AL+L+ K P
Sbjct: 120 YCQIGLVQYAEWIMGNLV-GGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKP 178
Query: 362 DIVTYNTLI 388
DIVTYNTL+
Sbjct: 179 DIVTYNTLV 187
Score = 58.2 bits (139), Expect = 7e-07
Identities = 32/115 (27%), Positives = 57/115 (49%)
Frame = +2
Query: 44 DVVSYNTVIWGFCKYGFAEQGFGLSSEMIKKGFTFDDYTRNILVKGFIDTGLWGYLEWIL 223
D+V+YN +I G+C E+ F S+M+ G + + T N L++G GL + ++
Sbjct: 724 DIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLV 783
Query: 224 DQFSHKGSAYVDVVGFNTLIHGYSKAGNANAALELLYRMRKEESFPDIVTYNTLI 388
+ +G + +N L+ G+ + GN +++L M + P TYN LI
Sbjct: 784 SEMRERG-LVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLI 837
>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503316|gb|AES84519.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1023
Score = 121 bits (304), Expect = 5e-26
Identities = 64/129 (49%), Positives = 81/129 (62%)
Frame = +2
Query: 2 LALDLLRDTSFGECDVVSYNTVIWGFCKYGFAEQGFGLSSEMIKKGFTFDDYTRNILVKG 181
LAL LR+ + D V+YNTVIWGFC+ G +QGFGL SEM+K+G FD T NILVKG
Sbjct: 147 LALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKG 206
Query: 182 FIDTGLWGYLEWILDQFSHKGSAYVDVVGFNTLIHGYSKAGNANAALELLYRMRKEESFP 361
+ GL Y EW++ G DV+G NTLI GY +AG + A EL+ + +
Sbjct: 207 YCRIGLVQYAEWVMYNLV-DGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKI 265
Query: 362 DIVTYNTLI 388
DIVTYNTL+
Sbjct: 266 DIVTYNTLL 274
Score = 55.1 bits (131), Expect = 6e-06
Identities = 33/113 (29%), Positives = 57/113 (50%)
Frame = +2
Query: 50 VSYNTVIWGFCKYGFAEQGFGLSSEMIKKGFTFDDYTRNILVKGFIDTGLWGYLEWILDQ 229
VSY T+I K G + F L S+M+ +G +FD T ++ G G E + +
Sbjct: 392 VSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFET 451
Query: 230 FSHKGSAYVDVVGFNTLIHGYSKAGNANAALELLYRMRKEESFPDIVTYNTLI 388
K + + V ++ L+ GY K G A +L +M KE P+++T++++I
Sbjct: 452 IL-KLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503
>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503561|gb|AES84764.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 989
Score = 118 bits (295), Expect = 6e-25
Identities = 63/129 (48%), Positives = 80/129 (62%)
Frame = +2
Query: 2 LALDLLRDTSFGECDVVSYNTVIWGFCKYGFAEQGFGLSSEMIKKGFTFDDYTRNILVKG 181
LAL LR+ + D V+YNTVIWGFC+ G +QGFGL SEM+K+G FD T NILVKG
Sbjct: 147 LALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKG 206
Query: 182 FIDTGLWGYLEWILDQFSHKGSAYVDVVGFNTLIHGYSKAGNANAALELLYRMRKEESFP 361
+ GL Y EW++ G DV+G NTLI GY +A + A EL+ + +
Sbjct: 207 YCRIGLVQYAEWVMYNLV-DGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKI 265
Query: 362 DIVTYNTLI 388
DIVTYNTL+
Sbjct: 266 DIVTYNTLL 274
Score = 57.0 bits (136), Expect = 2e-06
Identities = 36/115 (31%), Positives = 57/115 (49%)
Frame = +2
Query: 44 DVVSYNTVIWGFCKYGFAEQGFGLSSEMIKKGFTFDDYTRNILVKGFIDTGLWGYLEWIL 223
D+V+Y ++I G+ K G + EM +K FD N L+KG + G + ++
Sbjct: 600 DIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDP-RYVC 658
Query: 224 DQFSHKGSAYVDVVGFNTLIHGYSKAGNANAALELLYRMRKEESFPDIVTYNTLI 388
+ G A D + +NT+I+ Y G AL++L M+ P+ VTYN LI
Sbjct: 659 SRMIELGLA-PDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILI 712
Score = 55.1 bits (131), Expect = 6e-06
Identities = 33/113 (29%), Positives = 57/113 (50%)
Frame = +2
Query: 50 VSYNTVIWGFCKYGFAEQGFGLSSEMIKKGFTFDDYTRNILVKGFIDTGLWGYLEWILDQ 229
VSY T+I K G + F L S+M+ +G +FD T ++ G G E + +
Sbjct: 392 VSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFET 451
Query: 230 FSHKGSAYVDVVGFNTLIHGYSKAGNANAALELLYRMRKEESFPDIVTYNTLI 388
K + + V ++ L+ GY K G A +L +M KE P+++T++++I
Sbjct: 452 IL-KLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSII 503
>ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1|
predicted protein [Populus trichocarpa]
Length = 864
Score = 103 bits (257), Expect = 1e-20
Identities = 58/136 (42%), Positives = 78/136 (57%), Gaps = 7/136 (5%)
Frame = +2
Query: 2 LALDLLRDTSFGECDVVSYNTVIWGFCKYGFAEQGFGLSSEMIKKGFTFDDYTRNILVKG 181
LALDL+R+ + D V+YNT IWGFC+ G A QGFG S M+KK FD +T NILVKG
Sbjct: 64 LALDLIRNVDI-DVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKG 122
Query: 182 FIDTGLWGYLEWILDQF-----SHKGSAYVD--VVGFNTLIHGYSKAGNANAALELLYRM 340
F G Y EW++D G+ ++ +V + TLI Y K + AL L M
Sbjct: 123 FCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEM 182
Query: 341 RKEESFPDIVTYNTLI 388
+ PD+VTY+++I
Sbjct: 183 ISDGFLPDVVTYSSII 198
Score = 55.1 bits (131), Expect = 6e-06
Identities = 36/115 (31%), Positives = 53/115 (46%)
Frame = +2
Query: 44 DVVSYNTVIWGFCKYGFAEQGFGLSSEMIKKGFTFDDYTRNILVKGFIDTGLWGYLEWIL 223
D V+YN +I G K E+ ++M+ +G + T N+L+ G + GL IL
Sbjct: 644 DTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEIL 703
Query: 224 DQFSHKGSAYVDVVGFNTLIHGYSKAGNANAALELLYRMRKEESFPDIVTYNTLI 388
+ G D +NTLI G+ K GN A++ M + P TYN LI
Sbjct: 704 SKMKDSG-LDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLI 757