BLASTX nr result

ID: Atractylodes21_contig00038254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038254
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    79   5e-13
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    78   7e-13
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    77   1e-12

>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/74 (48%), Positives = 53/74 (71%)
 Frame = -3

Query: 268  IQNPYEQLSIITQVGSILDYIDDFEYLLSLVPRLPESQSLGYFLVGLQPDVKRWVHLHRP 89
            ++NP+E+LS + Q+GS+ ++++ FE L S V RLPE Q LGYF+ GL+  ++R V    P
Sbjct: 822  LENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKAHIRRRVRTLNP 881

Query: 88   NTRLQAMYLAKDVE 47
             TR+Q M +AKDVE
Sbjct: 882  TTRMQMMRIAKDVE 895


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/77 (49%), Positives = 53/77 (68%)
 Frame = -3

Query: 268 IQNPYEQLSIITQVGSILDYIDDFEYLLSLVPRLPESQSLGYFLVGLQPDVKRWVHLHRP 89
           ++NP+E+LS I Q GS+ ++++ FE L S V RLPE Q LGYF+ GL+P ++R V    P
Sbjct: 132 LENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIRRRVRTLNP 191

Query: 88  NTRLQAMYLAKDVEAML 38
             R+Q M +AKDVE  L
Sbjct: 192 LNRMQMMRIAKDVEEEL 208


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/74 (47%), Positives = 52/74 (70%)
 Frame = -3

Query: 268 IQNPYEQLSIITQVGSILDYIDDFEYLLSLVPRLPESQSLGYFLVGLQPDVKRWVHLHRP 89
           ++NP+E+LS + Q GS+ ++++ FE L S V RLPE Q LGYF+ GL+P ++R V    P
Sbjct: 149 LENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLKPQIRRRVRTLNP 208

Query: 88  NTRLQAMYLAKDVE 47
             R++ M +AKDVE
Sbjct: 209 RNRMEMMRIAKDVE 222


Top