BLASTX nr result

ID: Atractylodes21_contig00038217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038217
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...   310   2e-82
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   305   5e-81
ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   300   3e-79
ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   299   5e-79
ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|2...   296   2e-78

>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3691

 Score =  310 bits (794), Expect = 2e-82
 Identities = 157/241 (65%), Positives = 182/241 (75%)
 Frame = -3

Query: 726  WNHPMFPCCNAGFITSIVTLLNHVYCGVGNAKLSHGGGSGGANQRFNAPLPDEATIATIV 547
            WNHPMFP C  GF+ SIV+++ H+Y GVG+ K +  G SG ANQRF  P PDE TIATIV
Sbjct: 1247 WNHPMFPSCTPGFVASIVSVVTHIYSGVGDVKRNRTGVSGNANQRFMPPPPDEGTIATIV 1306

Query: 546  EMGFTRTRAEEALRRVETNSVEMAMEWLFSHAEDHVQEDDEXXXXXXXXXXXXSETPKAD 367
            EMGF+R RAEEALRRVETNSVE+AMEWLFSHA+D VQEDDE            SE  K D
Sbjct: 1307 EMGFSRARAEEALRRVETNSVELAMEWLFSHADDPVQEDDELARALALSLGSSSEGSKVD 1366

Query: 366  NTEKSADSQTGIVETKAPPVDDILAVILKLFRSSDSIAFTLTDLLITLCTRDKGEDRPKV 187
            N +KS D  T   + KAPPVDDILA  +KLF+SSD++AF+LTDLL+TLC R+KGEDRPKV
Sbjct: 1367 NVDKSVDLLTEEAQMKAPPVDDILAASVKLFQSSDTMAFSLTDLLVTLCNRNKGEDRPKV 1426

Query: 186  ISYLIQQLNLCRLGTSNDTSALCTISHTLALLLAEDVTTREIAAENGIVSVAIDLLMDFK 7
             SYLIQQ+ LC L  S D+SALC ISH LALL+ ED T REIAAENGI+   ID+L+ FK
Sbjct: 1427 ASYLIQQMKLCPLDFSKDSSALCMISHILALLVFEDGTVREIAAENGIIPATIDILVSFK 1486

Query: 6    A 4
            A
Sbjct: 1487 A 1487


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  305 bits (782), Expect = 5e-81
 Identities = 158/241 (65%), Positives = 183/241 (75%)
 Frame = -3

Query: 726  WNHPMFPCCNAGFITSIVTLLNHVYCGVGNAKLSHGGGSGGANQRFNAPLPDEATIATIV 547
            WNH MFP C+AGFI SIV+L+ H+Y GVG+ K S GG +G  NQRF  P PDE TIATIV
Sbjct: 1243 WNHQMFPSCSAGFIASIVSLVTHIYSGVGDVKRSRGGIAGSTNQRFMPPPPDENTIATIV 1302

Query: 546  EMGFTRTRAEEALRRVETNSVEMAMEWLFSHAEDHVQEDDEXXXXXXXXXXXXSETPKAD 367
            EMGFTR RAEEALRRVETNSVEMAMEWLFSHAED VQ+DDE            SE  K  
Sbjct: 1303 EMGFTRARAEEALRRVETNSVEMAMEWLFSHAEDPVQDDDELARALALSLGSSSEGSKVG 1362

Query: 366  NTEKSADSQTGIVETKAPPVDDILAVILKLFRSSDSIAFTLTDLLITLCTRDKGEDRPKV 187
            N +KS D+ T   + K PP++DILA  +KLF+SSD++AF+LTDLL+TLC R+KGEDR KV
Sbjct: 1363 NVDKSIDALTEEGQMKVPPIEDILAASVKLFQSSDTMAFSLTDLLVTLCNRNKGEDRLKV 1422

Query: 186  ISYLIQQLNLCRLGTSNDTSALCTISHTLALLLAEDVTTREIAAENGIVSVAIDLLMDFK 7
             SYLI+QL LC L  S D+SALC ISH LALLL ED T REIAA+NGIV+ A D+LM+FK
Sbjct: 1423 ASYLIEQLKLCPLDFSKDSSALCMISHILALLLFEDGTVREIAAQNGIVAAATDVLMNFK 1482

Query: 6    A 4
            A
Sbjct: 1483 A 1483


>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  300 bits (767), Expect = 3e-79
 Identities = 159/242 (65%), Positives = 180/242 (74%)
 Frame = -3

Query: 726  WNHPMFPCCNAGFITSIVTLLNHVYCGVGNAKLSHGGGSGGANQRFNAPLPDEATIATIV 547
            WNHPMFP C++ FITSI++L+ H+Y GVG+ K +  GGS   NQ F  P PDE TIATIV
Sbjct: 1610 WNHPMFPSCSSTFITSIISLVTHIYSGVGDVKRNRNGGS--TNQLFMPPPPDENTIATIV 1667

Query: 546  EMGFTRTRAEEALRRVETNSVEMAMEWLFSHAEDHVQEDDEXXXXXXXXXXXXSETPKAD 367
            EMGFTR RAEEALRRVETNSVE+AMEWLFS  ED VQEDDE            SET K D
Sbjct: 1668 EMGFTRARAEEALRRVETNSVELAMEWLFSRPEDPVQEDDELARALALSLGSSSETSKVD 1727

Query: 366  NTEKSADSQTGIVETKAPPVDDILAVILKLFRSSDSIAFTLTDLLITLCTRDKGEDRPKV 187
            + +KS D  T   +TKAPPVDDIL   +KLF+SSD++AF LTDLL+TLC R KGEDR KV
Sbjct: 1728 SIDKSMDILTEEGQTKAPPVDDILVASMKLFQSSDTMAFPLTDLLVTLCNRSKGEDRSKV 1787

Query: 186  ISYLIQQLNLCRLGTSNDTSALCTISHTLALLLAEDVTTREIAAENGIVSVAIDLLMDFK 7
            ++YLIQQL LC L  S D SAL  ISH LALLL ED +TREIAA NGIVS AID+LM FK
Sbjct: 1788 VTYLIQQLKLCPLEFSKDASALYMISHILALLLFEDGSTREIAARNGIVSAAIDILMSFK 1847

Query: 6    AR 1
            AR
Sbjct: 1848 AR 1849


>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score =  299 bits (765), Expect = 5e-79
 Identities = 153/242 (63%), Positives = 180/242 (74%)
 Frame = -3

Query: 726  WNHPMFPCCNAGFITSIVTLLNHVYCGVGNAKLSHGGGSGGANQRFNAPLPDEATIATIV 547
            WNHPMF  C+ GFI SI++L+ HVY GVG+ K +H    G  NQRF  P PDEATIATIV
Sbjct: 1236 WNHPMFCSCSPGFIASIISLVTHVYSGVGDVKRNHSNIVGSTNQRFMPPPPDEATIATIV 1295

Query: 546  EMGFTRTRAEEALRRVETNSVEMAMEWLFSHAEDHVQEDDEXXXXXXXXXXXXSETPKAD 367
            EMGF+R RAEEALRRVETNSVEMAMEWLFSHA+D VQEDDE            SE+ KA+
Sbjct: 1296 EMGFSRARAEEALRRVETNSVEMAMEWLFSHADDPVQEDDELARALALSLGSSSESTKAE 1355

Query: 366  NTEKSADSQTGIVETKAPPVDDILAVILKLFRSSDSIAFTLTDLLITLCTRDKGEDRPKV 187
            + EK+ D  T     K PPVDDILA  +KLF+SSDS+ F LTDLL+TLC++ KG+DRPKV
Sbjct: 1356 SAEKTIDVLTEEGHVKKPPVDDILAASVKLFQSSDSVPFQLTDLLVTLCSQGKGDDRPKV 1415

Query: 186  ISYLIQQLNLCRLGTSNDTSALCTISHTLALLLAEDVTTREIAAENGIVSVAIDLLMDFK 7
            ISYL+QQL LC L  S D  AL  ++H LALLL EDV+TREIAA+NGI+S  ID+L +FK
Sbjct: 1416 ISYLLQQLKLCPLDLSQDNCALSVLAHILALLLFEDVSTREIAAQNGIISTIIDILTNFK 1475

Query: 6    AR 1
             R
Sbjct: 1476 GR 1477


>ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|222859846|gb|EEE97393.1|
            predicted protein [Populus trichocarpa]
          Length = 3663

 Score =  296 bits (759), Expect = 2e-78
 Identities = 154/242 (63%), Positives = 181/242 (74%)
 Frame = -3

Query: 726  WNHPMFPCCNAGFITSIVTLLNHVYCGVGNAKLSHGGGSGGANQRFNAPLPDEATIATIV 547
            WNHPMFP C+ GFI+SIV+L+ H+Y GVG+ K +  G +G  NQRF  P PDE TIA IV
Sbjct: 1240 WNHPMFPSCSTGFISSIVSLVTHIYSGVGDVKRNRSGIAGSTNQRFMLPPPDENTIAMIV 1299

Query: 546  EMGFTRTRAEEALRRVETNSVEMAMEWLFSHAEDHVQEDDEXXXXXXXXXXXXSETPKAD 367
            EMGFTR RAEEALRRVETNSVEMAMEWLFSHAED VQEDDE            SE  K D
Sbjct: 1300 EMGFTRARAEEALRRVETNSVEMAMEWLFSHAEDPVQEDDELARALALSLGSSSEGLKID 1359

Query: 366  NTEKSADSQTGIVETKAPPVDDILAVILKLFRSSDSIAFTLTDLLITLCTRDKGEDRPKV 187
            + + S D+ T   +   PPV+DILA  +KLF+SSD++AF+LTDLL+TLC R+KGEDR KV
Sbjct: 1360 DEDNSIDAVTEEGQMTVPPVEDILAASVKLFQSSDTMAFSLTDLLVTLCNRNKGEDRLKV 1419

Query: 186  ISYLIQQLNLCRLGTSNDTSALCTISHTLALLLAEDVTTREIAAENGIVSVAIDLLMDFK 7
             SYLI+QL LC L  S D+SALC ISH LALLL ED T REIAA+NGIV+   ++LM+FK
Sbjct: 1420 ASYLIEQLKLCPLDFSKDSSALCMISHILALLLFEDGTVREIAAQNGIVAAVTNVLMNFK 1479

Query: 6    AR 1
            AR
Sbjct: 1480 AR 1481


Top