BLASTX nr result

ID: Atractylodes21_contig00038185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038185
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR86717.1| zinc finger protein [Populus euphratica]                93   2e-17
ref|XP_003588283.1| Cytochrome c biogenesis [Medicago truncatula...    89   5e-16
ref|XP_002523006.1| conserved hypothetical protein [Ricinus comm...    87   2e-15
ref|XP_002520031.1| conserved hypothetical protein [Ricinus comm...    66   3e-09

>gb|AAR86717.1| zinc finger protein [Populus euphratica]
          Length = 218

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/47 (91%), Positives = 44/47 (93%)
 Frame = +3

Query: 42  RCSETPRADHTERHESAGNASWQSGVKHP*RYEKRGRDDIIDVRTAP 182
           RCSETP ADHTERHESAGNASW+SGVKHP RYEKRGRDDII VRTAP
Sbjct: 10  RCSETPSADHTERHESAGNASWRSGVKHPMRYEKRGRDDIIYVRTAP 56


>ref|XP_003588283.1| Cytochrome c biogenesis [Medicago truncatula]
           gi|355477331|gb|AES58534.1| Cytochrome c biogenesis
           [Medicago truncatula]
          Length = 860

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +1

Query: 40  LAARKHPVLTTLRDTKAQVMPVGKVALSIPSGTKREVVMISSTSVPL 180
           LAARKHPVLTTLR+TKAQVMPVG+VALSIPSGTKREVVMISSTSVPL
Sbjct: 297 LAARKHPVLTTLRETKAQVMPVGEVALSIPSGTKREVVMISSTSVPL 343


>ref|XP_002523006.1| conserved hypothetical protein [Ricinus communis]
           gi|223537818|gb|EEF39436.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 58

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/53 (84%), Positives = 47/53 (88%)
 Frame = +1

Query: 22  RKGKVCLAARKHPVLTTLRDTKAQVMPVGKVALSIPSGTKREVVMISSTSVPL 180
           R G V  +ARKHPVLTTLRDTKAQV PVG+VALSIPSGTKREVVMISST VPL
Sbjct: 3   RGGGVSFSARKHPVLTTLRDTKAQVTPVGEVALSIPSGTKREVVMISSTFVPL 55


>ref|XP_002520031.1| conserved hypothetical protein [Ricinus communis]
           gi|223540795|gb|EEF42355.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 231

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = +3

Query: 60  RADHTERHESAGNASWQSGVKHP*RYEKRGRDDIIDVRTAP 182
           R +HTERHESAGN SW+SGVKH  RYEKRGRDDII +   P
Sbjct: 68  RVNHTERHESAGNTSWRSGVKHLKRYEKRGRDDIIYICITP 108


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