BLASTX nr result

ID: Atractylodes21_contig00038065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038065
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    74   1e-11
ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...    66   5e-09
ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis...    58   1e-06
ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...    55   7e-06

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 48/186 (25%), Positives = 95/186 (51%), Gaps = 7/186 (3%)
 Frame = +3

Query: 21  MEMAVLWNPSIQRSVGIVVPNLFGGKYQTILGFGVCPDTNDPKILK--FRQTREENVWGI 194
           ++  VLWNPSI  SV + +  +       +LGFG    TND K+++  +  T ++++   
Sbjct: 119 LKRIVLWNPSIGLSVTLPLQRISYKVSNVVLGFGFDSRTNDYKVIRIVYYSTNDDSLM-- 176

Query: 195 EDLTNTPPKLEVFTLNSGLWR-SPCSNLPSETIEVTRSQVAIDGSIYWLANDGVSFIDDG 371
                 PP++E+F L+ G WR +  +++P+  +    SQ+ ++G+I+W+          G
Sbjct: 177 -----VPPEVEIFELSRGTWRINNSASVPAYDVSKYSSQIVLEGAIHWV----------G 221

Query: 372 YRVIHNL-IMLFDLASEEIRVVGLPDDLALQPAQNLSISSLWESLVVLEYSTNTEK---Q 539
           Y     L I ++ +  EE +   +PD+++    Q+LS+    + L +++Y     +   +
Sbjct: 222 YYSPRELTIAVYVVHDEEFKEFRMPDEISGTALQHLSVMLCCQLLSIIQYKKRGSRLCYE 281

Query: 540 VCGVWV 557
            C +WV
Sbjct: 282 SCCIWV 287


>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449511918|ref|XP_004164088.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 391

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 9/182 (4%)
 Frame = +3

Query: 39  WNPSIQRSVGIVVPN----LFGGKYQTILGFGVCPDTNDPKILKFRQTREENVWGIEDLT 206
           WNPSIQR + +  P+    ++G  Y+  LGFG     ND K++  R    E    + D  
Sbjct: 123 WNPSIQRFLALPWPSDIFTVYGSPYKYALGFGFDSRANDFKLV--RLVYIEGGPPVYDY- 179

Query: 207 NTPPKLEVFTLNSGLWRSPCSNLPS-ETIEVTRSQVAIDGSIYWLANDGVSFIDD--GYR 377
             PP++E++ L++G WR    + P  E ++   +Q+ ++ +++W+A     FI    G+R
Sbjct: 180 ELPPRVELYQLSTGSWRQITDSAPCYEILKSQWTQIFMNEAVHWIA-----FIRSRRGFR 234

Query: 378 VIHNLIMLFDLASEEIRVVGLPDDLALQPAQNLSISSLWESLVVLE--YSTNTEKQVCGV 551
            +   I+ F +  E    + LPD L  +  QNL ++ L   L VL+  +     + V  V
Sbjct: 235 CV---ILRFHMDGEYFSTIPLPDCLVNEFPQNLKVAMLGGELCVLQCGWYPFGNRYVSSV 291

Query: 552 WV 557
           W+
Sbjct: 292 WM 293


>ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449531147|ref|XP_004172549.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 379

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
 Frame = +3

Query: 33  VLWNPSIQRSVGIV----VPNLFGGKYQTILGFGVCPDTNDPKILKFRQTREENVWGIED 200
           +LWNPSIQR V +         +G      LGFG     +D K+++     ++  +  + 
Sbjct: 117 LLWNPSIQRVVDVPRTSDTVTTYGVPDFYALGFGFDSCADDHKVVRLLYFADKVPFSYK- 175

Query: 201 LTNTPPKLEVFTLNSGLWRSPCSNLP-SETIEVTRSQVAIDGSIYWLANDGVSFIDDGYR 377
                PK+E++ + +G WR+  +  P  E +    +Q  ++G+++W+A      I  GYR
Sbjct: 176 ---RSPKVELYEVGTGSWRAINNKAPRCEIVRSGWTQAFVNGAVHWIA---YREIGTGYR 229

Query: 378 VIHNLIMLFDLASEEIRVVGLPDDLALQPAQNLSISSLWESLVV 509
                I+ FD+  E   ++ LPD LA     +L ++ L  +L +
Sbjct: 230 C---FILRFDIVKECFSIITLPDCLANSSPYDLKVTVLGGALSI 270


>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 6/181 (3%)
 Frame = +3

Query: 33  VLWNPSIQRSVGIVVPNLFGGKYQTILGFGVCPDTNDPKILKF-----RQTREENVWGIE 197
           +LWNP IQ+ + IV P + G  Y + +GFG     ND K+++       + R EN     
Sbjct: 122 ILWNPLIQKYM-IVKPRILGPVY-SFVGFGYDSRANDYKLIRMVSFQKSKFRSENF---- 175

Query: 198 DLTNTPPKLEVFTLNSGLWRSPCSNLPSETIEVTR-SQVAIDGSIYWLANDGVSFIDDGY 374
                 P++ +++LN G WR      P       R S   ++G ++W+A     +  D +
Sbjct: 176 ------PEIALYSLNEGSWRGIRQTGPLRYDTDQRVSSAFLNGVVHWIA-----YRADQH 224

Query: 375 RVIHNLIMLFDLASEEIRVVGLPDDLALQPAQNLSISSLWESLVVLEYSTNTEKQVCGVW 554
             + N+++ FD++ E    + LP  LA      LS+    ES + +  ++        +W
Sbjct: 225 EGVSNVVLGFDMSDEIFLEIALPSCLANVRPSCLSLMVYKESSISVCQASFLSSVQFHIW 284

Query: 555 V 557
           V
Sbjct: 285 V 285


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