BLASTX nr result

ID: Atractylodes21_contig00038057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038057
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   139   2e-31
ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   138   4e-31
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   137   1e-30
gb|ACU17851.1| unknown [Glycine max]                                  135   3e-30
ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   134   6e-30

>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
           ubiquitin-protein ligase Os04g0590900-like [Cucumis
           sativus]
          Length = 373

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/112 (61%), Positives = 84/112 (75%), Gaps = 4/112 (3%)
 Frame = +3

Query: 15  DDSGMNFSPLIIVVIGILASAFLLISYYTIISKYCKGRGR----NQLNPSLESENRNQST 182
           D+SG +FSPL+I +IGILASAFLL++YYTIISKYC    R       +PS E E+ +  T
Sbjct: 48  DNSGPHFSPLVIAIIGILASAFLLVTYYTIISKYCGNTNRLSGTGNHDPSEEYEDNHNPT 107

Query: 183 THDQWQHAANGLDESLIKSIAVCKYKKGDGVVEGSDCAVCLSEFQDGEGLRL 338
            H+ W  A  GLDE+LIKSI VCKYK+ DG+VEGSDC+VCLSEFQ+ E LRL
Sbjct: 108 FHEPWHVATTGLDEALIKSITVCKYKREDGLVEGSDCSVCLSEFQEDESLRL 159


>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
           vinifera]
          Length = 375

 Score =  138 bits (348), Expect = 4e-31
 Identities = 72/114 (63%), Positives = 89/114 (78%), Gaps = 5/114 (4%)
 Frame = +3

Query: 12  DDDSGMNFSPLIIVVIGILASAFLLISYYTIISKYC----KGRGRNQ-LNPSLESENRNQ 176
           D++SG NFSPL+I +IGILASAFLL+SYYTIISKYC    + R  NQ +N  LE +N N 
Sbjct: 46  DENSGPNFSPLVIAIIGILASAFLLVSYYTIISKYCGNMERERRENQDINEELE-DNHNP 104

Query: 177 STTHDQWQHAANGLDESLIKSIAVCKYKKGDGVVEGSDCAVCLSEFQDGEGLRL 338
           +  H+ W  A  GLDE+LIKSI +CKYKKGDG+VEG+DC+VCLSEF++ E LRL
Sbjct: 105 AL-HEPWHVATTGLDEALIKSITLCKYKKGDGLVEGTDCSVCLSEFEEEESLRL 157


>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 364

 Score =  137 bits (344), Expect = 1e-30
 Identities = 68/112 (60%), Positives = 82/112 (73%), Gaps = 3/112 (2%)
 Frame = +3

Query: 12  DDDSGMNFSPLIIVVIGILASAFLLISYYTIISKYCKGRGRNQLN---PSLESENRNQST 182
           DDDS  NFSPL+I VIG+L SAFLL+SYYTIISKYC  R  +Q      ++E E  +  +
Sbjct: 46  DDDSSPNFSPLVIAVIGVLVSAFLLVSYYTIISKYCGSRESSQSENHEENVELEEDHNPS 105

Query: 183 THDQWQHAANGLDESLIKSIAVCKYKKGDGVVEGSDCAVCLSEFQDGEGLRL 338
            H+ W     GLDE+LIKSI VCKYKKGDG+VE +DC+VCLSEFQD E +RL
Sbjct: 106 LHEPWHAPTIGLDEALIKSITVCKYKKGDGLVEVTDCSVCLSEFQDDESVRL 157


>gb|ACU17851.1| unknown [Glycine max]
          Length = 364

 Score =  135 bits (340), Expect = 3e-30
 Identities = 67/112 (59%), Positives = 81/112 (72%), Gaps = 3/112 (2%)
 Frame = +3

Query: 12  DDDSGMNFSPLIIVVIGILASAFLLISYYTIISKYCKGRGRNQLN---PSLESENRNQST 182
           DDDS  NFSPL+I VIG+L SAFLL+SYYTIISKYC  R  +Q      ++E E  +  +
Sbjct: 46  DDDSSPNFSPLVIAVIGVLVSAFLLVSYYTIISKYCGSRESSQSENHEENVELEEDHNPS 105

Query: 183 THDQWQHAANGLDESLIKSIAVCKYKKGDGVVEGSDCAVCLSEFQDGEGLRL 338
            H+ W     GLDE+LIKSI VCKYKKGDG+VE +DC+VCL EFQD E +RL
Sbjct: 106 LHEPWHAPTIGLDEALIKSITVCKYKKGDGLVEVTDCSVCLGEFQDDESVRL 157


>ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 370

 Score =  134 bits (338), Expect = 6e-30
 Identities = 69/113 (61%), Positives = 83/113 (73%), Gaps = 5/113 (4%)
 Frame = +3

Query: 15  DDSGMNFSPLIIVVIGILASAFLLISYYTIISKYCKGRGRNQL-----NPSLESENRNQS 179
           DDS  NFSPL+I VIG+LASAFLL+SYYTIISKYC  R  +Q      N  LE ++ N S
Sbjct: 49  DDSSPNFSPLVIAVIGVLASAFLLVSYYTIISKYCGNRESSQSEEHEENVELEEDDHNPS 108

Query: 180 TTHDQWQHAANGLDESLIKSIAVCKYKKGDGVVEGSDCAVCLSEFQDGEGLRL 338
             H+ W  +  GLDE+LIKSI  CKYKKGDG+VE +DC+VCLSEF+D E +RL
Sbjct: 109 H-HEPWHASTIGLDEALIKSITACKYKKGDGLVEVTDCSVCLSEFRDDESVRL 160


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