BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037986
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...   255   5e-66
emb|CBI17752.3| unnamed protein product [Vitis vinifera]              255   5e-66
ref|NP_193806.1| pentatricopeptide repeat-containing protein [Ar...   217   1e-54
ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ...   216   3e-54
ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|2...   212   5e-53

>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Vitis vinifera]
          Length = 1294

 Score =  255 bits (651), Expect = 5e-66
 Identities = 123/167 (73%), Positives = 137/167 (82%), Gaps = 3/167 (1%)
 Frame = +2

Query: 116  RFNFFSGHRKPTHNRPIVRGGIFSNRQTLNPNQ-NHQQPTTSFELQKWHPE--KSLTTPP 286
            +F FF GHRKP+ NRP V GG+FSNR TLNP     Q PTT F LQ W P+  K+L  PP
Sbjct: 551  KFYFFYGHRKPSQNRPTVHGGLFSNRTTLNPKPPTLQNPTTHFNLQNWDPDSPKALAIPP 610

Query: 287  RPSPSQHFFSVAQTLSPIARYIVDSFRKHKHWGPPVVADLNKLRRVTPNLVAEVLKVQSD 466
              +P + FF +A+ LSPIARYI DSFRKH++WGPPVVADLNKLRRVTP LVAEVLKVQ+D
Sbjct: 611  SKTPCERFFDIAKNLSPIARYICDSFRKHRNWGPPVVADLNKLRRVTPVLVAEVLKVQTD 670

Query: 467  PNISSKFFHWAGKQKGYKHDFASYNAFAYCLNRNNQFRAADQVPELM 607
            P I SKFFHWAGKQKGYKH+FASYNAFAYCLNR+NQFRAADQVPELM
Sbjct: 671  PVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELM 717


>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  255 bits (651), Expect = 5e-66
 Identities = 123/167 (73%), Positives = 137/167 (82%), Gaps = 3/167 (1%)
 Frame = +2

Query: 116 RFNFFSGHRKPTHNRPIVRGGIFSNRQTLNPNQ-NHQQPTTSFELQKWHPE--KSLTTPP 286
           +F FF GHRKP+ NRP V GG+FSNR TLNP     Q PTT F LQ W P+  K+L  PP
Sbjct: 12  KFYFFYGHRKPSQNRPTVHGGLFSNRTTLNPKPPTLQNPTTHFNLQNWDPDSPKALAIPP 71

Query: 287 RPSPSQHFFSVAQTLSPIARYIVDSFRKHKHWGPPVVADLNKLRRVTPNLVAEVLKVQSD 466
             +P + FF +A+ LSPIARYI DSFRKH++WGPPVVADLNKLRRVTP LVAEVLKVQ+D
Sbjct: 72  SKTPCERFFDIAKNLSPIARYICDSFRKHRNWGPPVVADLNKLRRVTPVLVAEVLKVQTD 131

Query: 467 PNISSKFFHWAGKQKGYKHDFASYNAFAYCLNRNNQFRAADQVPELM 607
           P I SKFFHWAGKQKGYKH+FASYNAFAYCLNR+NQFRAADQVPELM
Sbjct: 132 PVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELM 178


>ref|NP_193806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75211707|sp|Q9SVH3.1|PP328_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g20740 gi|5262214|emb|CAB45840.1| putative protein
           [Arabidopsis thaliana] gi|7268870|emb|CAB79074.1|
           putative protein [Arabidopsis thaliana]
           gi|332658957|gb|AEE84357.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  217 bits (552), Expect = 1e-54
 Identities = 103/168 (61%), Positives = 129/168 (76%), Gaps = 6/168 (3%)
 Frame = +2

Query: 122 NFFSGHRKPTHNRPIVRGGIFSNRQTL-----NPNQNHQQPTTSFELQKWHPEKSLTTPP 286
           NFF GHRKP+ NRP V GG+FSNRQ++      P  N     T F+L+KW PE  L  P 
Sbjct: 17  NFFHGHRKPSQNRPTVYGGLFSNRQSIPRVSPQPQSNSLAHRTPFDLRKWDPETHLPPPS 76

Query: 287 RPSPSQHFFSVAQTLSPIARYIVDSFRKHK-HWGPPVVADLNKLRRVTPNLVAEVLKVQS 463
            PS S    + ++ LSPIAR+++D+FRK++ HWGP VV++LNKLRRVTP++VAEVLK+ +
Sbjct: 77  PPSHSTVISAASERLSPIARFVLDAFRKNRNHWGPSVVSELNKLRRVTPSIVAEVLKLGN 136

Query: 464 DPNISSKFFHWAGKQKGYKHDFASYNAFAYCLNRNNQFRAADQVPELM 607
           D  +++KFFHWAGKQKGYKHDFA+YNAFAYCLNRN  FRAADQ+PELM
Sbjct: 137 DAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELM 184


>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487951|gb|AES69154.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 767

 Score =  216 bits (549), Expect = 3e-54
 Identities = 108/171 (63%), Positives = 131/171 (76%), Gaps = 7/171 (4%)
 Frame = +2

Query: 116 RFNFFSGHRKPTHNRPIVRGGIFSNRQTLNPNQ-NHQQPTTSFELQKWHPEKSLTTPPRP 292
           +F FF GHRKP+ NRP VRGG+FSNR+TL P +    +PT SF++QKW P   L+ P  P
Sbjct: 11  KFYFFYGHRKPSQNRPTVRGGLFSNRKTLTPPKPKSTKPTNSFQIQKWDPH-FLSQPNSP 69

Query: 293 SPS-----QHFFSVAQTLSPIARYIVDSFRKHKH-WGPPVVADLNKLRRVTPNLVAEVLK 454
           SPS     +  FS +  LSPIAR+I+D+FRK+ + WGPPVV +LNKLRRVTP LVAEVLK
Sbjct: 70  SPSPSPSPEATFSASLRLSPIARFILDAFRKNNNNWGPPVVTELNKLRRVTPTLVAEVLK 129

Query: 455 VQSDPNISSKFFHWAGKQKGYKHDFASYNAFAYCLNRNNQFRAADQVPELM 607
           VQ++P ++ KFFHW  KQKGY H+FASYNAF YCLNR N FRAADQ+PELM
Sbjct: 130 VQTNPTLAFKFFHWVEKQKGYHHNFASYNAFTYCLNRANHFRAADQLPELM 180


>ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|222842206|gb|EEE79753.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  212 bits (539), Expect = 5e-53
 Identities = 103/169 (60%), Positives = 135/169 (79%), Gaps = 8/169 (4%)
 Frame = +2

Query: 125 FFSGHRKPTHNRPIVRGGIFSNRQTLNPN--QNHQQPTTSFELQKWHPEKSLTTPPRPSP 298
           FF GHRKP+ NRP+VRGG+F+NRQT+ P   +N   P   F+L KW P+++L   P+PS 
Sbjct: 18  FFYGHRKPSQNRPVVRGGLFTNRQTVKPQPPKNPITPFKPFDLHKWDPQQNLPHQPQPSK 77

Query: 299 -----SQHFFSVAQTLSPIARYIVDSFRKHKH-WGPPVVADLNKLRRVTPNLVAEVLKVQ 460
                S+H  +++Q LSPIAR+I+D+FRK+++ WGP VV +L KLRRVTP+LVAEVLKV+
Sbjct: 78  PQSPRSRHSLALSQRLSPIARFILDAFRKNRNQWGPEVVTELCKLRRVTPDLVAEVLKVE 137

Query: 461 SDPNISSKFFHWAGKQKGYKHDFASYNAFAYCLNRNNQFRAADQVPELM 607
           ++P +++KFFHWAGKQKG+KH FASYNAFAY LNR+N FRAADQ+PELM
Sbjct: 138 NNPQLATKFFHWAGKQKGFKHTFASYNAFAYNLNRSNFFRAADQLPELM 186