BLASTX nr result

ID: Atractylodes21_contig00037985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037985
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17752.3| unnamed protein product [Vitis vinifera]              206   1e-51
ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|2...   202   3e-50
ref|XP_004140286.1| PREDICTED: pentatricopeptide repeat-containi...   198   4e-49
ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi...   196   1e-48
ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containi...   196   2e-48

>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  206 bits (525), Expect = 1e-51
 Identities = 99/119 (83%), Positives = 109/119 (91%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 QVPELMNMQGKPPTEKQFEILIRMHSDANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDAL 177
           QVPELMNMQGKPP+EKQFEILIRMH DANRGLRVYYVYEKMKKFG+KPRVFLYNRIMD L
Sbjct: 173 QVPELMNMQGKPPSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDGL 232

Query: 176 VKTSHLDLSLSVYKDFKNDGLVEEGITFMILVKGFCKAGRVEEALELLGQMR-RLCKPD 3
           VKT HLDL++SVY+DFK DGLVEE +T+MILVKG CKAGR++E LELL +MR  LCKPD
Sbjct: 233 VKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLELLDRMRGNLCKPD 291


>ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|222842206|gb|EEE79753.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  202 bits (513), Expect = 3e-50
 Identities = 95/119 (79%), Positives = 109/119 (91%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 QVPELMNMQGKPPTEKQFEILIRMHSDANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDAL 177
           Q+PELM  QGKPPTEKQFEILIRMHSDANRGLRVYYVY+KM KFGVKPRVFLYNRIMD+L
Sbjct: 181 QLPELMEAQGKPPTEKQFEILIRMHSDANRGLRVYYVYQKMVKFGVKPRVFLYNRIMDSL 240

Query: 176 VKTSHLDLSLSVYKDFKNDGLVEEGITFMILVKGFCKAGRVEEALELLGQMR-RLCKPD 3
           +KT HLDL+LSVY+DF+ DGLVEE +T+MIL+KG CKAGR+EE +E+LG+MR  LCKPD
Sbjct: 241 IKTGHLDLALSVYEDFRRDGLVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENLCKPD 299



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/95 (31%), Positives = 52/95 (54%)
 Frame = -2

Query: 305 FEILIRMHSDANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDALVKTSHLDLSLSVYKDFK 126
           + ILI+    A R   +  V  +M++   KP VF Y  ++ AL    +LD  L V+++ K
Sbjct: 268 YMILIKGLCKAGRIEEMMEVLGRMRENLCKPDVFAYTAMVRALAGEGNLDACLRVWEEMK 327

Query: 125 NDGLVEEGITFMILVKGFCKAGRVEEALELLGQMR 21
            DG+  + + ++ LV   CK GRV++  E+  +M+
Sbjct: 328 RDGVEPDVMAYVTLVTALCKGGRVDKGYEVFKEMK 362


>ref|XP_004140286.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Cucumis sativus]
           gi|449531474|ref|XP_004172711.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20740-like [Cucumis sativus]
          Length = 726

 Score =  198 bits (503), Expect = 4e-49
 Identities = 95/119 (79%), Positives = 108/119 (90%), Gaps = 1/119 (0%)
 Frame = -2

Query: 356 QVPELMNMQGKPPTEKQFEILIRMHSDANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDAL 177
           Q+PELM+ QGKPP+EKQFEILIRMH DANRGLRVYYVYEKMKKFGV PRVFLYNRI+DAL
Sbjct: 178 QIPELMDSQGKPPSEKQFEILIRMHCDANRGLRVYYVYEKMKKFGVVPRVFLYNRILDAL 237

Query: 176 VKTSHLDLSLSVYKDFKNDGLVEEGITFMILVKGFCKAGRVEEALELLGQMR-RLCKPD 3
           VKT HLDL+L+VY+DF+ +GLVEE +TFMIL+KG CKAGRV+E LELL +MR  LCKPD
Sbjct: 238 VKTDHLDLALTVYRDFQENGLVEESVTFMILIKGLCKAGRVDEMLELLARMRANLCKPD 296


>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein At4g20740-like
            [Vitis vinifera]
          Length = 1294

 Score =  196 bits (499), Expect = 1e-48
 Identities = 92/113 (81%), Positives = 104/113 (92%)
 Frame = -2

Query: 356  QVPELMNMQGKPPTEKQFEILIRMHSDANRGLRVYYVYEKMKKFGVKPRVFLYNRIMDAL 177
            QVPELMNMQGKPP+EKQFEILIRMH DANRGLRVYYVYEKMKKFG+KPRVFLYNRIMD L
Sbjct: 712  QVPELMNMQGKPPSEKQFEILIRMHIDANRGLRVYYVYEKMKKFGIKPRVFLYNRIMDGL 771

Query: 176  VKTSHLDLSLSVYKDFKNDGLVEEGITFMILVKGFCKAGRVEEALELLGQMRR 18
            VKT HLDL++SVY+DFK DGLVEE +T+MILVKG CKAGR++E LE+  +MR+
Sbjct: 772  VKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVLEVWEEMRK 824


>ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Glycine max]
          Length = 733

 Score =  196 bits (497), Expect = 2e-48
 Identities = 95/120 (79%), Positives = 108/120 (90%), Gaps = 2/120 (1%)
 Frame = -2

Query: 356 QVPELMNMQGKPPTEKQFEILIRMHSDANRGLRVYYVYEKMK-KFGVKPRVFLYNRIMDA 180
           Q+PELM  QGKPP+EKQFEILIRMHSDANRGLRVY+VYEKM+ KFGVKPRVFLYNR+MDA
Sbjct: 185 QLPELMESQGKPPSEKQFEILIRMHSDANRGLRVYHVYEKMRNKFGVKPRVFLYNRVMDA 244

Query: 179 LVKTSHLDLSLSVYKDFKNDGLVEEGITFMILVKGFCKAGRVEEALELLGQMR-RLCKPD 3
           LV+T HLDL+LSVY D K DGLVEE +TFM+LVKG CK GR++E LE+LG+MR RLCKPD
Sbjct: 245 LVRTGHLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVLGRMRERLCKPD 304


Top