BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037942
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    55   2e-16
gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein ...    62   8e-16
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...    57   7e-15
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...    54   3e-14
emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]    56   3e-14

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 55.5 bits (132), Expect(2) = 2e-16
 Identities = 25/41 (60%), Positives = 32/41 (78%)
 Frame = -3

Query: 257  EFWHNTSLHLATKITPFKALYGRDPPVLLRVGMGNTSVDSL 135
            EF +NTS H +TK++PFK LYGRDPP ++R   G TSV+SL
Sbjct: 1373 EFSYNTSPHTSTKMSPFKVLYGRDPPHVVRAPKGQTSVESL 1413



 Score = 55.1 bits (131), Expect(2) = 2e-16
 Identities = 23/46 (50%), Positives = 37/46 (80%)
 Frame = -2

Query: 138  SQLKERDVVLDDLRVNLIRAQQKMKNSADSKQRDEQFAVGDWVYLK 1
            + L++RD ++DDL+VNL+RAQQ+MK+ AD  + + +F VGD V+L+
Sbjct: 1415 AMLQDRDAIIDDLQVNLVRAQQRMKHYADGSRTEVEFQVGDAVFLR 1460


>gb|AAD39272.1|AC007203_4 Similar to retrotransposon polyprotein [Arabidopsis thaliana]
          Length = 1264

 Score = 62.0 bits (149), Expect(2) = 8e-16
 Identities = 29/45 (64%), Positives = 37/45 (82%)
 Frame = -2

Query: 135  QLKERDVVLDDLRVNLIRAQQKMKNSADSKQRDEQFAVGDWVYLK 1
            QLKERD++L+ +R NL RAQ+ MK +AD K+RD  FAVGDWV+LK
Sbjct: 1021 QLKERDLMLEHIRANLQRAQEIMKRNADMKRRDVVFAVGDWVHLK 1065



 Score = 46.2 bits (108), Expect(2) = 8e-16
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = -3

Query: 257  EFWHNTSLHLATKITPFKALYGRDPPVLLRVGMGNT 150
            EF  NT+ H A K +PFK +YGRDPP L+R  +G+T
Sbjct: 978  EFSFNTAYHSALKTSPFKVVYGRDPPSLVRFELGST 1013


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score = 57.0 bits (136), Expect(2) = 7e-15
 Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 3/44 (6%)
 Frame = -3

Query: 257  EFWHNTSLHLATKITPFKALYGRDPPVLLRVG---MGNTSVDSL 135
            E+W+NTS H ATK TPF+A+YGR+PPVLLR G     N +V+ L
Sbjct: 1399 EYWYNTSYHSATKTTPFQAVYGREPPVLLRYGDIPTNNANVEEL 1442



 Score = 48.1 bits (113), Expect(2) = 7e-15
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = -2

Query: 132  LKERDVVLDDLRVNLIRAQQKMKNSADSKQRDEQFAVGDWVYLK 1
            LK+RD +L +LR NL  AQ +MK +AD  +RD  F + +WVYLK
Sbjct: 1443 LKDRDGMLVELRENLEIAQAQMKKAADKSRRDVAFEIDEWVYLK 1486


>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score = 53.5 bits (127), Expect(2) = 3e-14
 Identities = 25/44 (56%), Positives = 33/44 (75%)
 Frame = -2

Query: 132  LKERDVVLDDLRVNLIRAQQKMKNSADSKQRDEQFAVGDWVYLK 1
            L+ERD +L  ++ +L+RAQ  MK SAD  +R+  FAVGDWVYLK
Sbjct: 2518 LRERDAMLVQIQQHLLRAQHLMKASADKHRRELSFAVGDWVYLK 2561



 Score = 49.7 bits (117), Expect(2) = 3e-14
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = -3

Query: 257  EFWHNTSLHLATKITPFKALYGRDPPVLLRVGMGNTS 147
            E W+NTS H A K TPF+ +YGR+PP ++R   G+T+
Sbjct: 2474 ELWYNTSFHTALKATPFQVVYGREPPAIVRFEEGSTN 2510


>emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
          Length = 1448

 Score = 55.8 bits (133), Expect(2) = 3e-14
 Identities = 22/38 (57%), Positives = 30/38 (78%)
 Frame = -3

Query: 257 EFWHNTSLHLATKITPFKALYGRDPPVLLRVGMGNTSV 144
           E+W+NT+ H +T  TPF+A+YGRDPP L+R G  +TSV
Sbjct: 782 EYWYNTTFHSSTNTTPFRAVYGRDPPPLIRFGSDSTSV 819



 Score = 47.4 bits (111), Expect(2) = 3e-14
 Identities = 22/44 (50%), Positives = 34/44 (77%)
 Frame = -2

Query: 132 LKERDVVLDDLRVNLIRAQQKMKNSADSKQRDEQFAVGDWVYLK 1
           L+ERD++L++L+ +L  AQ KMK+S D+ +   QF VGD+VY+K
Sbjct: 826 LQERDLILNELKDHLXCAQSKMKSSXDAHRXAVQFEVGDFVYIK 869