BLASTX nr result

ID: Atractylodes21_contig00037924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037924
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27...    94   9e-18
emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]    94   9e-18
ref|XP_004145670.1| PREDICTED: F-box/kelch-repeat protein At3g27...    85   5e-15
ref|XP_002509526.1| ubiquitin-protein ligase, putative [Ricinus ...    84   9e-15
ref|XP_002298618.1| f-box family protein [Populus trichocarpa] g...    82   3e-14

>ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Vitis
           vinifera]
          Length = 437

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/71 (61%), Positives = 54/71 (76%)
 Frame = +2

Query: 5   DYNRGWGVAFKSLGNELLVIGAXXXXXXXXXMAIYTCSPEPQSDHLPEWKLLDNGKIQLS 184
           D+NRGWGVAFKSLGNELLVIGA         M IYTC P+P ++ L  WK LD+G+ +LS
Sbjct: 368 DFNRGWGVAFKSLGNELLVIGASSVSFAGHGMTIYTCCPDPDAEEL-LWKPLDSGRNRLS 426

Query: 185 HFIMNCSVMVA 217
           HFI+NCS+M+A
Sbjct: 427 HFILNCSIMIA 437


>emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]
          Length = 514

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/71 (61%), Positives = 54/71 (76%)
 Frame = +2

Query: 5   DYNRGWGVAFKSLGNELLVIGAXXXXXXXXXMAIYTCSPEPQSDHLPEWKLLDNGKIQLS 184
           D+NRGWGVAFKSLGNELLVIGA         M IYTC P+P ++ L  WK LD+G+ +LS
Sbjct: 445 DFNRGWGVAFKSLGNELLVIGASSVSFAGHGMTIYTCXPDPDAEEL-LWKPLDSGRNRLS 503

Query: 185 HFIMNCSVMVA 217
           HFI+NCS+M+A
Sbjct: 504 HFILNCSIMIA 514


>ref|XP_004145670.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Cucumis
           sativus] gi|449502024|ref|XP_004161522.1| PREDICTED:
           F-box/kelch-repeat protein At3g27150-like [Cucumis
           sativus]
          Length = 422

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/69 (59%), Positives = 51/69 (73%)
 Frame = +2

Query: 11  NRGWGVAFKSLGNELLVIGAXXXXXXXXXMAIYTCSPEPQSDHLPEWKLLDNGKIQLSHF 190
           N+GWGVAFKSLG+ELLVIGA         M+IYTC+P+P++D L +W+ LD G   LS F
Sbjct: 355 NKGWGVAFKSLGSELLVIGASVESSTNNSMSIYTCTPDPRADRL-QWRRLDGGTNHLSPF 413

Query: 191 IMNCSVMVA 217
           I+NC VMVA
Sbjct: 414 ILNCCVMVA 422


>ref|XP_002509526.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223549425|gb|EEF50913.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 483

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 43/73 (58%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
 Frame = +2

Query: 5   DYNRGWGVAFKSLGNELLVIGAXXXXXXXXX--MAIYTCSPEPQSDHLPEWKLLDNGKIQ 178
           D +RGWGVAFKSLGNELLVIGA           MAIYTC P+ ++DH   W  L+ G+ +
Sbjct: 411 DSSRGWGVAFKSLGNELLVIGASTSIVSYSGDGMAIYTCCPDDKTDHALHWTPLECGRNR 470

Query: 179 LSHFIMNCSVMVA 217
           LS+FI+NCSVMVA
Sbjct: 471 LSNFILNCSVMVA 483


>ref|XP_002298618.1| f-box family protein [Populus trichocarpa]
           gi|222845876|gb|EEE83423.1| f-box family protein
           [Populus trichocarpa]
          Length = 390

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/73 (58%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = +2

Query: 5   DYNRGWGVAFKSLGNELLVIGA--XXXXXXXXXMAIYTCSPEPQSDHLPEWKLLDNGKIQ 178
           D N+GWGVAFKSLGNELLVIGA           MAIYTC P+ +++ L +W+ L+ GK +
Sbjct: 319 DSNKGWGVAFKSLGNELLVIGASTSTVSYSGDGMAIYTCRPDSEAEEL-QWRPLECGKNR 377

Query: 179 LSHFIMNCSVMVA 217
           LS+FI+NCSVMVA
Sbjct: 378 LSNFILNCSVMVA 390


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