BLASTX nr result

ID: Atractylodes21_contig00037921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037921
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   118   6e-25
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   117   7e-25
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   108   4e-22
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...   103   1e-20
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    91   7e-17

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  118 bits (295), Expect = 6e-25
 Identities = 54/105 (51%), Positives = 79/105 (75%)
 Frame = +3

Query: 3   FQWENKRREISSWEELKRLLLAQFRSTSEGSLCEQFLAVRQESTFVEYKRKFVSMAAPLD 182
           +QWENKRR   +WE +K  +L QFR  + GSL EQ+L+  Q ++  EY+RKFV  AAPLD
Sbjct: 224 YQWENKRRPFRNWESMKSFVLTQFRPLNVGSLHEQWLSTTQTASVWEYRRKFVETAAPLD 283

Query: 183 GIPEDVFVGQFINGLLPEIKAEVRLLAPVGLRKAIDVASMVEERN 317
           GIPE++ +G+FI+GL PE+++E+R+L P  L +A+++A  +EERN
Sbjct: 284 GIPEEILMGKFIHGLNPELQSEIRVLNPYNLDQAMELALKLEERN 328


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/108 (54%), Positives = 73/108 (67%)
 Frame = +3

Query: 3    FQWENKRREISSWEELKRLLLAQFRSTSEGSLCEQFLAVRQESTFVEYKRKFVSMAAPLD 182
            +QW + R    SWE LKR LL +FR T EGSLCEQFLAVRQ+ T   Y R+F  +  PL 
Sbjct: 820  YQWTDSREVFGSWENLKRRLLLRFRLTQEGSLCEQFLAVRQQGTVAAYWREFEILETPLK 879

Query: 183  GIPEDVFVGQFINGLLPEIKAEVRLLAPVGLRKAIDVASMVEERNNAV 326
            GI E+V    F+NGLLPEI+AE RLL P GL   +++A  VE+RN A+
Sbjct: 880  GISEEVMESTFMNGLLPEIRAEQRLLQPYGLGHLMEMAQRVEDRNLAM 927


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/106 (49%), Positives = 74/106 (69%)
 Frame = +3

Query: 3   FQWENKRREISSWEELKRLLLAQFRSTSEGSLCEQFLAVRQESTFVEYKRKFVSMAAPLD 182
           +QWEN+RR I  W E++ +LL +FR T+ GSL EQ+L+  QE   VEY+RKF+ + APL+
Sbjct: 149 YQWENRRRPIHRWSEMRWMLLRRFRETALGSLQEQWLSHEQEEGVVEYRRKFIELLAPLE 208

Query: 183 GIPEDVFVGQFINGLLPEIKAEVRLLAPVGLRKAIDVASMVEERNN 320
           GIPE +   QF++ L  EIK EVR++ P  L  A+++A  VEE+ N
Sbjct: 209 GIPESIAQAQFVSKLKEEIKNEVRIMGPSSLDHAMELAVQVEEKLN 254


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/108 (46%), Positives = 72/108 (66%)
 Frame = +3

Query: 3   FQWENKRREISSWEELKRLLLAQFRSTSEGSLCEQFLAVRQESTFVEYKRKFVSMAAPLD 182
           FQWE  RR   SW + K  L+  FRST EG+L +Q LA++Q +T  E++R+F  +AAPL 
Sbjct: 155 FQWEEGRRPFRSWVDFKESLIVCFRSTQEGTLHDQLLALKQTTTVKEFRRQFEIIAAPLK 214

Query: 183 GIPEDVFVGQFINGLLPEIKAEVRLLAPVGLRKAIDVASMVEERNNAV 326
           G+ EDV    F+NGL P+++AE+R  +P GL K + VA  +EE+  A+
Sbjct: 215 GLAEDVLEAAFVNGLRPDMQAELRQWSPFGLDKKMQVAQKIEEKLKAL 262


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 8/149 (5%)
 Frame = +3

Query: 3   FQWENKRREISSWEELKRLLLAQFRSTSEGSLCEQFLAVRQESTFVEYKRKFVSMAAPLD 182
           F+W   R+   SW+ELK  +  +FR    G+ C +FLA++QE +  EY +KF  ++APL 
Sbjct: 118 FRWAENRKWFRSWKELKERMYNRFRCRDYGTACARFLAIKQEGSVSEYLQKFEELSAPLP 177

Query: 183 GIPEDVFVGQFINGLLPEIKAEVRLLAPVGLRKAIDVASMVEERNNAVS*G--------R 338
            + E+V  G F NGL P I+ EV  +  VGL   ++ A + EE+      G         
Sbjct: 178 EMAEEVLEGTFTNGLDPRIRKEVFAMRVVGLEDLMEAAQLAEEKAEVTKGGPYPYPYSKE 237

Query: 339 GLRPNLVTSRPLEGTPPDKGQAVRANPVN 425
             + NL +S    G+PP K   +    VN
Sbjct: 238 AAKTNLGSSPKTFGSPPTKMVTLAKKVVN 266