BLASTX nr result

ID: Atractylodes21_contig00037913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037913
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   139   2e-31
gb|AAU93584.2| Polyprotein, putative [Solanum demissum]               137   7e-31
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   137   1e-30
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   135   5e-30
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   135   5e-30

>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/117 (54%), Positives = 81/117 (69%)
 Frame = -3

Query: 351  NGVVERKHRHLLNVARSFLFQGGIPLNMWIECVLTAAYLINRTPTLVLGGKCPYEMVYGF 172
            NGVVERKHRH+LNVARS +FQ  +PL  W ECVLTA YLINR PT +L  K P+E++Y  
Sbjct: 923  NGVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPFEVLYNR 982

Query: 171  EPVLSHLRNFGCLCFATKLNNSDKFSFRSEKCVLLGYSNSKKGYKLYSLDSHQVIFS 1
             P L+HLR FGC C+ T ++   KF  R+  CV LGY + KKGYK+  L + ++  S
Sbjct: 983  PPSLTHLRVFGCECYVTNVHPKQKFDPRASICVFLGYPHGKKGYKVLDLQTQKISVS 1039


>gb|AAU93584.2| Polyprotein, putative [Solanum demissum]
          Length = 1055

 Score =  137 bits (346), Expect = 7e-31
 Identities = 60/115 (52%), Positives = 81/115 (70%)
 Frame = -3

Query: 351 NGVVERKHRHLLNVARSFLFQGGIPLNMWIECVLTAAYLINRTPTLVLGGKCPYEMVYGF 172
           NG+ +RKHRH+L V+R+  FQG IPL  W+ECVL   YLINR PT VL G  PYE+ +  
Sbjct: 474 NGITKRKHRHILEVSRALRFQGNIPLKFWVECVLVVVYLINRLPTTVLQGLTPYEVFHKV 533

Query: 171 EPVLSHLRNFGCLCFATKLNNSDKFSFRSEKCVLLGYSNSKKGYKLYSLDSHQVI 7
           +  L HLR FGC+C+AT+L  + K S R E CV +GYS+++KGY +YSL   +++
Sbjct: 534 KAKLDHLRTFGCICYATRLPKTSKLSPRPEACVFMGYSSTQKGYVMYSLQQRKLL 588


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/118 (53%), Positives = 86/118 (72%), Gaps = 1/118 (0%)
 Frame = -3

Query: 351  NGVVERKHRHLLNVARSFLFQGGIPLNMWIECVLTAAYLINRTPTLVLGGKCPYEMVYGF 172
            NG VERKHRH+LNVAR+ LFQG +P+  W E +LTA +LINRTP+ VL GK PYE+++G 
Sbjct: 656  NGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSAVLKGKTPYELLFGE 715

Query: 171  EPVLSHLRNFGCLCFA-TKLNNSDKFSFRSEKCVLLGYSNSKKGYKLYSLDSHQVIFS 1
             P    LR+FGCLC+A  +  N DKF+ RS KCV +GY + KK +++Y L++ ++  S
Sbjct: 716  RPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFAS 773


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/118 (52%), Positives = 85/118 (72%), Gaps = 1/118 (0%)
 Frame = -3

Query: 351 NGVVERKHRHLLNVARSFLFQGGIPLNMWIECVLTAAYLINRTPTLVLGGKCPYEMVYGF 172
           NG VERKHRH+LN+AR+  FQ  +P+  W EC+L+AAYLINRTP+++L GK PYEM+Y  
Sbjct: 446 NGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKT 505

Query: 171 EPVLSHLRNFGCLCFATKLNN-SDKFSFRSEKCVLLGYSNSKKGYKLYSLDSHQVIFS 1
            P  SHLR FG LC+A   N+  DKF+ RS +CV +GY + +KG++L+ L+  +   S
Sbjct: 506 APKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVS 563


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/118 (52%), Positives = 85/118 (72%), Gaps = 1/118 (0%)
 Frame = -3

Query: 351  NGVVERKHRHLLNVARSFLFQGGIPLNMWIECVLTAAYLINRTPTLVLGGKCPYEMVYGF 172
            NG VERKHRH+LN+AR+  FQ  +P+  W EC+L+AAYLINRTP+++L GK PYEM+Y  
Sbjct: 670  NGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKT 729

Query: 171  EPVLSHLRNFGCLCFATKLNN-SDKFSFRSEKCVLLGYSNSKKGYKLYSLDSHQVIFS 1
             P  SHLR FG LC+A   N+  DKF+ RS +CV +GY + +KG++L+ L+  +   S
Sbjct: 730  APKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVS 787


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