BLASTX nr result

ID: Atractylodes21_contig00037800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037800
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                64   5e-11
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    64   5e-11
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       62   3e-09
ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea ma...    60   3e-09
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          59   3e-09

>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 64.3 bits (155), Expect(2) = 5e-11
 Identities = 27/46 (58%), Positives = 34/46 (73%)
 Frame = +3

Query: 63  IRMLRWSCGRTLLDRIPNGVFRAELGVAPITDKSREGRLRWFGHIR 200
           +RMLRW CG T  D+I N V R ++GVA + DK RE RLRWFGH++
Sbjct: 584 MRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVK 629



 Score = 27.7 bits (60), Expect(2) = 5e-11
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 1   KGKFYRVVIRAFMLY 45
           KGKFYRVV+R  +LY
Sbjct: 550 KGKFYRVVVRPALLY 564


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 64.3 bits (155), Expect(2) = 5e-11
 Identities = 27/46 (58%), Positives = 34/46 (73%)
 Frame = +3

Query: 63  IRMLRWSCGRTLLDRIPNGVFRAELGVAPITDKSREGRLRWFGHIR 200
           +RMLRW CG T  D+I N V R ++GVA + DK RE RLRWFGH++
Sbjct: 116 MRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVK 161



 Score = 27.7 bits (60), Expect(2) = 5e-11
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +1

Query: 1   KGKFYRVVIRAFMLY 45
           KGKFYRVV+R  +LY
Sbjct: 82  KGKFYRVVVRPALLY 96


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 61.6 bits (148), Expect(2) = 3e-09
 Identities = 26/45 (57%), Positives = 32/45 (71%)
 Frame = +3

Query: 63  IRMLRWSCGRTLLDRIPNGVFRAELGVAPITDKSREGRLRWFGHI 197
           +RMLRW CG+T  D+I N   R  +GVAPI +K  E RLRWFGH+
Sbjct: 268 MRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRLRWFGHV 312



 Score = 24.6 bits (52), Expect(2) = 3e-09
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 1   KGKFYRVVIRAFMLY*T 51
           KGKFYR  +R  +LY T
Sbjct: 234 KGKFYRTAVRPTILYGT 250


>ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea mays]
           gi|238014750|gb|ACR38410.1| unknown [Zea mays]
          Length = 215

 Score = 60.1 bits (144), Expect(2) = 3e-09
 Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
 Frame = +3

Query: 45  LDELCC--IRMLRWSCGRTLLDRIPNGVFRAELGVAPITDKSREGRLRWFGHIR 200
           + +LC   +RMLRW CG T  DR+ N   R  +GVAPI +K  + RLRWFGHI+
Sbjct: 99  VQQLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLMQHRLRWFGHIQ 152



 Score = 26.2 bits (56), Expect(2) = 3e-09
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +1

Query: 1   KGKFYRVVIRAFMLY 45
           KGKFYR  IR  MLY
Sbjct: 73  KGKFYRTAIRPAMLY 87


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 59.3 bits (142), Expect(2) = 3e-09
 Identities = 26/46 (56%), Positives = 32/46 (69%)
 Frame = +3

Query: 63  IRMLRWSCGRTLLDRIPNGVFRAELGVAPITDKSREGRLRWFGHIR 200
           ++MLRW  G T LD+I N   R  +GVAPI +K  E RLRWFGH+R
Sbjct: 434 VKMLRWMSGHTRLDKIRNEDIRERVGVAPIVEKIVESRLRWFGHVR 479



 Score = 26.6 bits (57), Expect(2) = 3e-09
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +1

Query: 1   KGKFYRVVIRAFMLY*T 51
           KGKFYR  IR  MLY T
Sbjct: 400 KGKFYRTAIRPAMLYGT 416


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