BLASTX nr result
ID: Atractylodes21_contig00037800
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00037800 (201 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAT40504.2| Polyprotein, putative [Solanum demissum] 64 5e-11 gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu... 64 5e-11 gb|ABB00038.1| reverse transcriptase family member [Glycine max] 62 3e-09 ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea ma... 60 3e-09 gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 59 3e-09 >gb|AAT40504.2| Polyprotein, putative [Solanum demissum] Length = 868 Score = 64.3 bits (155), Expect(2) = 5e-11 Identities = 27/46 (58%), Positives = 34/46 (73%) Frame = +3 Query: 63 IRMLRWSCGRTLLDRIPNGVFRAELGVAPITDKSREGRLRWFGHIR 200 +RMLRW CG T D+I N V R ++GVA + DK RE RLRWFGH++ Sbjct: 584 MRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVK 629 Score = 27.7 bits (60), Expect(2) = 5e-11 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +1 Query: 1 KGKFYRVVIRAFMLY 45 KGKFYRVV+R +LY Sbjct: 550 KGKFYRVVVRPALLY 564 >gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum] Length = 213 Score = 64.3 bits (155), Expect(2) = 5e-11 Identities = 27/46 (58%), Positives = 34/46 (73%) Frame = +3 Query: 63 IRMLRWSCGRTLLDRIPNGVFRAELGVAPITDKSREGRLRWFGHIR 200 +RMLRW CG T D+I N V R ++GVA + DK RE RLRWFGH++ Sbjct: 116 MRMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVK 161 Score = 27.7 bits (60), Expect(2) = 5e-11 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +1 Query: 1 KGKFYRVVIRAFMLY 45 KGKFYRVV+R +LY Sbjct: 82 KGKFYRVVVRPALLY 96 >gb|ABB00038.1| reverse transcriptase family member [Glycine max] Length = 377 Score = 61.6 bits (148), Expect(2) = 3e-09 Identities = 26/45 (57%), Positives = 32/45 (71%) Frame = +3 Query: 63 IRMLRWSCGRTLLDRIPNGVFRAELGVAPITDKSREGRLRWFGHI 197 +RMLRW CG+T D+I N R +GVAPI +K E RLRWFGH+ Sbjct: 268 MRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRLRWFGHV 312 Score = 24.6 bits (52), Expect(2) = 3e-09 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +1 Query: 1 KGKFYRVVIRAFMLY*T 51 KGKFYR +R +LY T Sbjct: 234 KGKFYRTAVRPTILYGT 250 >ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea mays] gi|238014750|gb|ACR38410.1| unknown [Zea mays] Length = 215 Score = 60.1 bits (144), Expect(2) = 3e-09 Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 2/54 (3%) Frame = +3 Query: 45 LDELCC--IRMLRWSCGRTLLDRIPNGVFRAELGVAPITDKSREGRLRWFGHIR 200 + +LC +RMLRW CG T DR+ N R +GVAPI +K + RLRWFGHI+ Sbjct: 99 VQQLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLMQHRLRWFGHIQ 152 Score = 26.2 bits (56), Expect(2) = 3e-09 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = +1 Query: 1 KGKFYRVVIRAFMLY 45 KGKFYR IR MLY Sbjct: 73 KGKFYRTAIRPAMLY 87 >gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] Length = 562 Score = 59.3 bits (142), Expect(2) = 3e-09 Identities = 26/46 (56%), Positives = 32/46 (69%) Frame = +3 Query: 63 IRMLRWSCGRTLLDRIPNGVFRAELGVAPITDKSREGRLRWFGHIR 200 ++MLRW G T LD+I N R +GVAPI +K E RLRWFGH+R Sbjct: 434 VKMLRWMSGHTRLDKIRNEDIRERVGVAPIVEKIVESRLRWFGHVR 479 Score = 26.6 bits (57), Expect(2) = 3e-09 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = +1 Query: 1 KGKFYRVVIRAFMLY*T 51 KGKFYR IR MLY T Sbjct: 400 KGKFYRTAIRPAMLYGT 416