BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037778
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM55238.1| integrase [Beta vulgaris]                              114   6e-24
gb|ABH08430.1| putative integrase [Beta vulgaris]                     114   6e-24
gb|AAL35396.1| Opie2a pol [Zea mays] gi|168251075|gb|ACA21858.1|...   113   2e-23
ref|ZP_06597243.1| putative integrase core domain protein, parti...   110   1e-22
gb|AAD20307.1| copia-type pol polyprotein [Zea mays]                  109   2e-22

>gb|ABM55238.1| integrase [Beta vulgaris]
          Length = 1516

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/96 (55%), Positives = 70/96 (72%)
 Frame = -2

Query: 306  GKLTRASFKPKTISTVSTPLQLLHMDLFGPIPVQSIGGKYYTMVIVDDYSRYTWVFFLRN 127
            GK  R+SFK KTI + + PL+L+H+DL GP+ +QS  GK Y +VIVDDYSRYTWV FL +
Sbjct: 730  GKQVRSSFKSKTIVSTTKPLELIHIDLCGPMRIQSRSGKRYVLVIVDDYSRYTWVIFLSS 789

Query: 126  KSDVADEILKYIKKVENMNDVKVKMIRSDHGTEFRN 19
            K +  DE L + K+V+N++  K+  IRSDHG EF N
Sbjct: 790  KDETYDEFLVFAKRVQNLSGHKIMHIRSDHGKEFEN 825


>gb|ABH08430.1| putative integrase [Beta vulgaris]
          Length = 1516

 Score =  114 bits (286), Expect = 6e-24
 Identities = 53/96 (55%), Positives = 70/96 (72%)
 Frame = -2

Query: 306  GKLTRASFKPKTISTVSTPLQLLHMDLFGPIPVQSIGGKYYTMVIVDDYSRYTWVFFLRN 127
            GK  R+SFK KTI + + PL+L+H+DL GP+ +QS  GK Y +VIVDDYSRYTWV FL +
Sbjct: 730  GKQVRSSFKSKTIVSTTKPLELIHIDLCGPMRIQSRSGKRYVLVIVDDYSRYTWVIFLSS 789

Query: 126  KSDVADEILKYIKKVENMNDVKVKMIRSDHGTEFRN 19
            K +  DE L + K+V+N++  K+  IRSDHG EF N
Sbjct: 790  KDETYDEFLVFAKRVQNLSGHKIMHIRSDHGKEFEN 825


>gb|AAL35396.1| Opie2a pol [Zea mays] gi|168251075|gb|ACA21858.1| Opie2a pol
           protein [Zea mays]
          Length = 1048

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/100 (51%), Positives = 73/100 (73%)
 Frame = -2

Query: 306 GKLTRASFKPKTISTVSTPLQLLHMDLFGPIPVQSIGGKYYTMVIVDDYSRYTWVFFLRN 127
           GK  R S   K + T S PL++LHMDLFGP+   SIGG  Y +VIVDD+SR+TWVFFL++
Sbjct: 165 GKQVRGSHHTKNVMTTSRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFLQD 224

Query: 126 KSDVADEILKYIKKVENMNDVKVKMIRSDHGTEFRNSVLE 7
           KS+    + +Y+++ +N  ++KVK IRSD+G+EF+N  +E
Sbjct: 225 KSETQGTLKRYLRRAQNEFELKVKKIRSDNGSEFKNLQVE 264


>ref|ZP_06597243.1| putative integrase core domain protein, partial [Bifidobacterium
           breve DSM 20213 = JCM 1192] gi|291380530|gb|EFE88048.1|
           putative integrase core domain protein [Bifidobacterium
           breve DSM 20213 = JCM 1192]
          Length = 188

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/100 (54%), Positives = 73/100 (73%)
 Frame = -2

Query: 306 GKLTRASFKPKTISTVSTPLQLLHMDLFGPIPVQSIGGKYYTMVIVDDYSRYTWVFFLRN 127
           GK   A    K I + S PL+LLHMDLFGPI   SIGG  Y +VIVDD+SR+TWVFFL++
Sbjct: 17  GKQVGAYHPAKNILSTSRPLKLLHMDLFGPIAYISIGGNKYGLVIVDDFSRFTWVFFLKD 76

Query: 126 KSDVADEILKYIKKVENMNDVKVKMIRSDHGTEFRNSVLE 7
           KS+    + K+I++V+N  ++KVK IRSD+ +EFRN+ +E
Sbjct: 77  KSEAKGVVKKFIRRVQNEFELKVKNIRSDNSSEFRNTQVE 116


>gb|AAD20307.1| copia-type pol polyprotein [Zea mays]
          Length = 1063

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/101 (51%), Positives = 69/101 (68%)
 Frame = -2

Query: 306 GKLTRASFKPKTISTVSTPLQLLHMDLFGPIPVQSIGGKYYTMVIVDDYSRYTWVFFLRN 127
           GK        K I T   PL+LLHMDLFGPI   SIGG  Y +VIVDDYSR+TWVFFL+ 
Sbjct: 163 GKQVGTHHPHKNIMTTDRPLELLHMDLFGPIAYISIGGSKYCLVIVDDYSRFTWVFFLQE 222

Query: 126 KSDVADEILKYIKKVENMNDVKVKMIRSDHGTEFRNSVLES 4
           KS   + +  ++++ +N   +++K IRSD+GTEF+NS +ES
Sbjct: 223 KSQTQETLKGFLRRAQNEFGLRIKKIRSDNGTEFKNSQIES 263