BLASTX nr result

ID: Atractylodes21_contig00037761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037761
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301841.1| multidrug resistance protein ABC transporter...   223   1e-56
ref|XP_002321297.1| multidrug resistance protein ABC transporter...   214   4e-54
ref|XP_002526533.1| multidrug resistance-associated protein 2, 6...   212   2e-53
emb|CBI37201.3| unnamed protein product [Vitis vinifera]              204   6e-51
ref|XP_002269589.1| PREDICTED: ABC transporter C family member 5...   204   6e-51

>ref|XP_002301841.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222843567|gb|EEE81114.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 391

 Score =  223 bits (568), Expect = 1e-56
 Identities = 105/158 (66%), Positives = 124/158 (78%)
 Frame = +3

Query: 3   YDGVCLITTSAQGEKGNWEPLLLPASQCLAWFVLSFSTLNCKVKTLKRLPLVMRVWWVTS 182
           +DGV LI  + +G   +W  + +PA+Q LAWFVLSFS L CK K  ++ P+++RVWW  S
Sbjct: 112 FDGVALIREAVKGNDVDWSEICVPAAQGLAWFVLSFSALQCKFKLSEKFPVLLRVWWFFS 171

Query: 183 FMITLCTLYLDGKEFAMEGSKHLNSHLLGNLAATPGLGFLCFVALRGVTGIHVVRGSDLQ 362
           F+I LCTLY+DG  F  EGSKHL+SH++ N AATP L FLCFVA RGVTGI V R SDLQ
Sbjct: 172 FLICLCTLYVDGSSFFTEGSKHLSSHVVANFAATPALAFLCFVAFRGVTGIQVCRNSDLQ 231

Query: 363 EPLLVEEDAGCLKVTPYSDAGLFSLATLSWLNSLLSIG 476
           EPLL+EE+AGCLKVTPYSDAGLFSL TLSWLN LLSIG
Sbjct: 232 EPLLLEEEAGCLKVTPYSDAGLFSLVTLSWLNPLLSIG 269


>ref|XP_002321297.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222862070|gb|EEE99612.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1513

 Score =  214 bits (546), Expect = 4e-54
 Identities = 102/158 (64%), Positives = 122/158 (77%)
 Frame = +3

Query: 3   YDGVCLITTSAQGEKGNWEPLLLPASQCLAWFVLSFSTLNCKVKTLKRLPLVMRVWWVTS 182
           +DGV LI  +  G+  +W  + LPA+Q LAWFVLSFS L+CK K  ++ P+++RVWW  S
Sbjct: 97  FDGVALIKEAVNGKDVDWSVICLPAAQGLAWFVLSFSVLHCKFKPSEKFPVLLRVWWFFS 156

Query: 183 FMITLCTLYLDGKEFAMEGSKHLNSHLLGNLAATPGLGFLCFVALRGVTGIHVVRGSDLQ 362
           F I LCTLY+DG  F   GSKHL+SH+  N  ATP L FLCFVA+RGVTGI V R S+LQ
Sbjct: 157 FFICLCTLYVDGSSFFTGGSKHLSSHVAANFTATPTLAFLCFVAIRGVTGIQVCRNSELQ 216

Query: 363 EPLLVEEDAGCLKVTPYSDAGLFSLATLSWLNSLLSIG 476
           EPLL+EE+AGCLKVTPY +AGLFSLATLSWLN LLSIG
Sbjct: 217 EPLLLEEEAGCLKVTPYFEAGLFSLATLSWLNPLLSIG 254


>ref|XP_002526533.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223534094|gb|EEF35811.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1504

 Score =  212 bits (540), Expect = 2e-53
 Identities = 103/158 (65%), Positives = 124/158 (78%)
 Frame = +3

Query: 3   YDGVCLITTSAQGEKGNWEPLLLPASQCLAWFVLSFSTLNCKVKTLKRLPLVMRVWWVTS 182
           +DG+ LI  +  G+  +W  + LPA+Q LAWFVLSFS L+CK K  ++ PL++RVWW  S
Sbjct: 115 FDGIALIREAVNGKVVDWSIICLPAAQGLAWFVLSFSALHCKFKASEQFPLLLRVWWFFS 174

Query: 183 FMITLCTLYLDGKEFAMEGSKHLNSHLLGNLAATPGLGFLCFVALRGVTGIHVVRGSDLQ 362
           F+I LCTLY+DG+ F +EG KHL+S +  N AATP L FLCFVA+RGVTGI V R SDLQ
Sbjct: 175 FLICLCTLYVDGRSFLIEGVKHLSSSV-ANFAATPALAFLCFVAIRGVTGIQVCRNSDLQ 233

Query: 363 EPLLVEEDAGCLKVTPYSDAGLFSLATLSWLNSLLSIG 476
           EPLL+EE+AGCLKVTPYSDA LFSLATLSWLN LLS G
Sbjct: 234 EPLLLEEEAGCLKVTPYSDATLFSLATLSWLNPLLSSG 271


>emb|CBI37201.3| unnamed protein product [Vitis vinifera]
          Length = 1360

 Score =  204 bits (519), Expect = 6e-51
 Identities = 98/157 (62%), Positives = 120/157 (76%)
 Frame = +3

Query: 6   DGVCLITTSAQGEKGNWEPLLLPASQCLAWFVLSFSTLNCKVKTLKRLPLVMRVWWVTSF 185
           DG+ LI  +  G+  NW  L LPA+Q LAWFVLS S L+CK K  ++ PL++RVWW  SF
Sbjct: 116 DGIGLIRGALIGKTANWSLLCLPAAQFLAWFVLSVSALHCKFKVSEKFPLLLRVWWFVSF 175

Query: 186 MITLCTLYLDGKEFAMEGSKHLNSHLLGNLAATPGLGFLCFVALRGVTGIHVVRGSDLQE 365
           +I LC++Y+D K F  EG  H+++H+L N AA+P L FL FVA+RGVTGI V R SDLQE
Sbjct: 176 IIWLCSVYVDAKGFFREGLNHVSAHVLANFAASPALAFLFFVAIRGVTGIQVRRNSDLQE 235

Query: 366 PLLVEEDAGCLKVTPYSDAGLFSLATLSWLNSLLSIG 476
           PLL EE+AGCLKVTPYS+AGLFSL TLSWLN LLS+G
Sbjct: 236 PLLPEEEAGCLKVTPYSEAGLFSLVTLSWLNPLLSVG 272


>ref|XP_002269589.1| PREDICTED: ABC transporter C family member 5-like [Vitis vinifera]
          Length = 1773

 Score =  204 bits (519), Expect = 6e-51
 Identities = 98/157 (62%), Positives = 120/157 (76%)
 Frame = +3

Query: 6   DGVCLITTSAQGEKGNWEPLLLPASQCLAWFVLSFSTLNCKVKTLKRLPLVMRVWWVTSF 185
           DG+ LI  +  G+  NW  L LPA+Q LAWFVLS S L+CK K  ++ PL++RVWW  SF
Sbjct: 357 DGIGLIRGALIGKTANWSLLCLPAAQFLAWFVLSVSALHCKFKVSEKFPLLLRVWWFVSF 416

Query: 186 MITLCTLYLDGKEFAMEGSKHLNSHLLGNLAATPGLGFLCFVALRGVTGIHVVRGSDLQE 365
           +I LC++Y+D K F  EG  H+++H+L N AA+P L FL FVA+RGVTGI V R SDLQE
Sbjct: 417 IIWLCSVYVDAKGFFREGLNHVSAHVLANFAASPALAFLFFVAIRGVTGIQVRRNSDLQE 476

Query: 366 PLLVEEDAGCLKVTPYSDAGLFSLATLSWLNSLLSIG 476
           PLL EE+AGCLKVTPYS+AGLFSL TLSWLN LLS+G
Sbjct: 477 PLLPEEEAGCLKVTPYSEAGLFSLVTLSWLNPLLSVG 513


Top