BLASTX nr result

ID: Atractylodes21_contig00037676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037676
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...   189   1e-55
emb|CBI27426.3| unnamed protein product [Vitis vinifera]              187   7e-55
ref|XP_003520145.1| PREDICTED: ruBisCO large subunit-binding pro...   189   9e-55
ref|XP_003516734.1| PREDICTED: ruBisCO large subunit-binding pro...   186   1e-53
ref|XP_002890669.1| hypothetical protein ARALYDRAFT_890123 [Arab...   189   3e-53

>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score =  189 bits (481), Expect(2) = 1e-55
 Identities = 98/128 (76%), Positives = 111/128 (86%), Gaps = 2/128 (1%)
 Frame = +2

Query: 2   FRNPKIPKSTRKSL--NPITAMAKQIHFNHDGSTTTKLLAGVNMVAELIGVTLGPRGRNV 175
           F N  +P+ +  +   NP  AMAK+++FNHDGS T KL AGV+MVAEL+GVTLGP+GRNV
Sbjct: 7   FSNLTLPRRSFSTTAWNP-RAMAKELYFNHDGSATKKLQAGVDMVAELVGVTLGPKGRNV 65

Query: 176 VLQNKYGPPKIVNDGETVLKEIQLEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIMLAHG 355
           VLQNKYGPPKIVNDGETVLKEI+LEDPLENVGVKLVRQAGAKTN LAGDGSTTS++LA G
Sbjct: 66  VLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNHLAGDGSTTSVILARG 125

Query: 356 LITEGVKV 379
           LI EGVKV
Sbjct: 126 LIAEGVKV 133



 Score = 52.0 bits (123), Expect(2) = 1e-55
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +1

Query: 445 LKVIAAGMNPIQISRGIQRTAEALVSELKL 534
           +KVIAAGMNPIQISRGI++TA ALVSELKL
Sbjct: 131 VKVIAAGMNPIQISRGIEKTAMALVSELKL 160


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  187 bits (475), Expect(2) = 7e-55
 Identities = 92/107 (85%), Positives = 101/107 (94%)
 Frame = +2

Query: 59  MAKQIHFNHDGSTTTKLLAGVNMVAELIGVTLGPRGRNVVLQNKYGPPKIVNDGETVLKE 238
           MAK+++FNHDGS T KL AGV+MVAEL+GVTLGP+GRNVVLQNKYGPPKIVNDGETVLKE
Sbjct: 1   MAKELYFNHDGSATKKLQAGVDMVAELVGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKE 60

Query: 239 IQLEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIMLAHGLITEGVKV 379
           I+LEDPLENVGVKLVRQAGAKTN LAGDGSTTS++LA GLI EGVKV
Sbjct: 61  IELEDPLENVGVKLVRQAGAKTNHLAGDGSTTSVILARGLIAEGVKV 107



 Score = 52.0 bits (123), Expect(2) = 7e-55
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +1

Query: 445 LKVIAAGMNPIQISRGIQRTAEALVSELKL 534
           +KVIAAGMNPIQISRGI++TA ALVSELKL
Sbjct: 105 VKVIAAGMNPIQISRGIEKTAMALVSELKL 134


>ref|XP_003520145.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 646

 Score =  189 bits (481), Expect(2) = 9e-55
 Identities = 98/130 (75%), Positives = 109/130 (83%), Gaps = 4/130 (3%)
 Frame = +2

Query: 2   FRNPKIPKSTRKSLNPIT----AMAKQIHFNHDGSTTTKLLAGVNMVAELIGVTLGPRGR 169
           F NP      R SL+  +    AMAK+++FNHDGS T KLLAGV+MVAEL+GVTLGP+GR
Sbjct: 8   FANPSSIPRLRNSLSSSSISPRAMAKELYFNHDGSATKKLLAGVDMVAELLGVTLGPKGR 67

Query: 170 NVVLQNKYGPPKIVNDGETVLKEIQLEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIMLA 349
           NVVL NKYGPPKIVNDGETVLKEI+LEDPLENVGVKLVRQAGAKTND AGDGSTTS++LA
Sbjct: 68  NVVLPNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDQAGDGSTTSVVLA 127

Query: 350 HGLITEGVKV 379
            GLI EG KV
Sbjct: 128 RGLIREGTKV 137



 Score = 49.3 bits (116), Expect(2) = 9e-55
 Identities = 23/29 (79%), Positives = 28/29 (96%)
 Frame = +1

Query: 448 KVIAAGMNPIQISRGIQRTAEALVSELKL 534
           KVIAAGMNP+QI+RGI++TA ALVSEL+L
Sbjct: 136 KVIAAGMNPVQIARGIEKTAAALVSELRL 164


>ref|XP_003516734.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 575

 Score =  186 bits (472), Expect(2) = 1e-53
 Identities = 91/107 (85%), Positives = 100/107 (93%)
 Frame = +2

Query: 59  MAKQIHFNHDGSTTTKLLAGVNMVAELIGVTLGPRGRNVVLQNKYGPPKIVNDGETVLKE 238
           MAK+++FNHDGS   KLLAGV+MVAEL+GVTLGP+GRNVVL NKYGPPKIVNDGETVLKE
Sbjct: 1   MAKELYFNHDGSAMKKLLAGVDMVAELLGVTLGPKGRNVVLPNKYGPPKIVNDGETVLKE 60

Query: 239 IQLEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIMLAHGLITEGVKV 379
           I+LEDPLENVGVKLVRQAGAKTND AGDGSTTS++LAHGLI EG KV
Sbjct: 61  IELEDPLENVGVKLVRQAGAKTNDQAGDGSTTSVVLAHGLIREGAKV 107



 Score = 49.3 bits (116), Expect(2) = 1e-53
 Identities = 23/29 (79%), Positives = 28/29 (96%)
 Frame = +1

Query: 448 KVIAAGMNPIQISRGIQRTAEALVSELKL 534
           KVIAAGMNP+QI+RGI++TA ALVSEL+L
Sbjct: 106 KVIAAGMNPVQIARGIEKTATALVSELRL 134


>ref|XP_002890669.1| hypothetical protein ARALYDRAFT_890123 [Arabidopsis lyrata subsp.
           lyrata] gi|297336511|gb|EFH66928.1| hypothetical protein
           ARALYDRAFT_890123 [Arabidopsis lyrata subsp. lyrata]
          Length = 538

 Score =  189 bits (481), Expect(2) = 3e-53
 Identities = 92/111 (82%), Positives = 103/111 (92%)
 Frame = +2

Query: 56  AMAKQIHFNHDGSTTTKLLAGVNMVAELIGVTLGPRGRNVVLQNKYGPPKIVNDGETVLK 235
           A AK++HFN DG+ T KL AG +MVA+L+GVTLGP+GRN+VLQNKYGPPKIVNDGETVLK
Sbjct: 30  AAAKEVHFNRDGAVTKKLQAGADMVAKLLGVTLGPKGRNIVLQNKYGPPKIVNDGETVLK 89

Query: 236 EIQLEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIMLAHGLITEGVKVQKA 388
           EI+LEDPLENVGVKLVRQAGAKTNDLAGDGSTTSI+LAHGLITEG+KV  A
Sbjct: 90  EIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIILAHGLITEGIKVVSA 140



 Score = 44.3 bits (103), Expect(2) = 3e-53
 Identities = 19/29 (65%), Positives = 27/29 (93%)
 Frame = +1

Query: 445 LKVIAAGMNPIQISRGIQRTAEALVSELK 531
           +KV++AG NPIQ++RGI+RTA+ALV EL+
Sbjct: 135 IKVVSAGTNPIQVARGIERTAKALVLELR 163


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