BLASTX nr result

ID: Atractylodes21_contig00037619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037619
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39204.1| unknown [Lotus japonicus]                              144   1e-32
ref|XP_003593896.1| Small nuclear ribonucleoprotein-associated p...   144   1e-32
ref|XP_002519649.1| conserved hypothetical protein [Ricinus comm...   143   2e-32
ref|XP_002322446.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262...   140   2e-31

>gb|AFK39204.1| unknown [Lotus japonicus]
          Length = 111

 Score =  144 bits (363), Expect = 1e-32
 Identities = 67/85 (78%), Positives = 75/85 (88%)
 Frame = -2

Query: 524 EDKSNISHVKKLLFRRMLVGVNDGRFFMGAFYCMDKQGNIILQDTVEFRSTRRSSSSPME 345
           +  S +S V+KLLFRRMLVG+ DGRFF+G FYC+DKQGNIILQD VE+RSTRRSS SPME
Sbjct: 17  DSSSRVSRVRKLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQDAVEYRSTRRSSPSPME 76

Query: 344 QRGLGLILIPSSCRTSCHVDCSIDE 270
           QR LGLILIPSSCR +CHVDCSIDE
Sbjct: 77  QRCLGLILIPSSCRATCHVDCSIDE 101


>ref|XP_003593896.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|357447245|ref|XP_003593898.1| Small
           nuclear ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|355482944|gb|AES64147.1| Small nuclear
           ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|355482946|gb|AES64149.1| Small nuclear
           ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|388515765|gb|AFK45944.1| unknown
           [Medicago truncatula]
          Length = 113

 Score =  144 bits (363), Expect = 1e-32
 Identities = 67/90 (74%), Positives = 77/90 (85%)
 Frame = -2

Query: 539 GQTSFEDKSNISHVKKLLFRRMLVGVNDGRFFMGAFYCMDKQGNIILQDTVEFRSTRRSS 360
           G +   +   +S V+KLLFR+MLVG+ DGRFF+G FYCMDKQGNIILQDTVE+RSTRRSS
Sbjct: 14  GSSDSLESDRVSRVRKLLFRQMLVGIKDGRFFLGNFYCMDKQGNIILQDTVEYRSTRRSS 73

Query: 359 SSPMEQRGLGLILIPSSCRTSCHVDCSIDE 270
            SPMEQR +GLILIPSSCR SCHVDCS+DE
Sbjct: 74  PSPMEQRCIGLILIPSSCRMSCHVDCSVDE 103


>ref|XP_002519649.1| conserved hypothetical protein [Ricinus communis]
           gi|223541066|gb|EEF42622.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score =  143 bits (360), Expect = 2e-32
 Identities = 71/106 (66%), Positives = 86/106 (81%), Gaps = 7/106 (6%)
 Frame = -2

Query: 566 EMENAMH-AAGQTSFEDKSN------ISHVKKLLFRRMLVGVNDGRFFMGAFYCMDKQGN 408
           ++E AM  +A Q    DKSN      +S V+KLLFR+MLVG+ DGRFF+G F+C+DKQGN
Sbjct: 4   DVEKAMEVSAAQPGSSDKSNSNSSGPVSRVRKLLFRKMLVGIKDGRFFLGTFHCIDKQGN 63

Query: 407 IILQDTVEFRSTRRSSSSPMEQRGLGLILIPSSCRTSCHVDCSIDE 270
           IILQD VE+RSTRR+S SPMEQR LGLILIP+SCRT+CHVDCSI+E
Sbjct: 64  IILQDAVEYRSTRRTSPSPMEQRCLGLILIPASCRTTCHVDCSIEE 109


>ref|XP_002322446.1| predicted protein [Populus trichocarpa] gi|222869442|gb|EEF06573.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  140 bits (354), Expect = 1e-31
 Identities = 68/101 (67%), Positives = 81/101 (80%), Gaps = 3/101 (2%)
 Frame = -2

Query: 563 MENAMHAAGQTSFEDKSN---ISHVKKLLFRRMLVGVNDGRFFMGAFYCMDKQGNIILQD 393
           ME  M  +  T   + S+   +S  +KLLFRRMLVG+ DGRFF+G+F+C+DKQGNIILQD
Sbjct: 1   MEEEMEISSSTQATESSSSDIVSRARKLLFRRMLVGIKDGRFFLGSFHCIDKQGNIILQD 60

Query: 392 TVEFRSTRRSSSSPMEQRGLGLILIPSSCRTSCHVDCSIDE 270
            VE+R+T RSS SPMEQR LGLILIPSSCRTSCHVDCSI+E
Sbjct: 61  AVEYRNTHRSSPSPMEQRCLGLILIPSSCRTSCHVDCSIEE 101


>ref|XP_002282858.1| PREDICTED: uncharacterized protein LOC100262900 [Vitis vinifera]
          Length = 116

 Score =  140 bits (352), Expect = 2e-31
 Identities = 66/80 (82%), Positives = 75/80 (93%)
 Frame = -2

Query: 509 ISHVKKLLFRRMLVGVNDGRFFMGAFYCMDKQGNIILQDTVEFRSTRRSSSSPMEQRGLG 330
           ++ V+ LLFRRMLVGV+DGRFF+G+F+CMDKQGNIILQDTVE+RSTRRSS SPMEQR LG
Sbjct: 28  VTKVRMLLFRRMLVGVSDGRFFLGSFHCMDKQGNIILQDTVEYRSTRRSSPSPMEQRCLG 87

Query: 329 LILIPSSCRTSCHVDCSIDE 270
           LILIP SCRTSCHVDCSI+E
Sbjct: 88  LILIPFSCRTSCHVDCSIEE 107


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