BLASTX nr result

ID: Atractylodes21_contig00037602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037602
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   194   2e-47
ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containi...   159   5e-37
ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containi...   151   2e-34
ref|XP_002522838.1| pentatricopeptide repeat-containing protein,...   147   3e-33
ref|XP_003574111.1| PREDICTED: pentatricopeptide repeat-containi...   144   2e-32

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  194 bits (492), Expect = 2e-47
 Identities = 95/161 (59%), Positives = 122/161 (75%), Gaps = 2/161 (1%)
 Frame = -1

Query: 480 DSKRKLYSQLNSILCXXXXXXXXXXE--PLVELLDIPWSPTLSHSCKSLHRREVARWRKQ 307
           DS ++L   L+SILC          +  PL ++LD+PW PTLSH+  SL R+EV+R RKQ
Sbjct: 70  DSTKQLSQTLSSILCGGSPDSQLTNDEKPLEKVLDVPWFPTLSHNNISLRRKEVSRERKQ 129

Query: 306 KWVFKSTQGSRFGRLVRLCANKLGADATIQVFGILGRETGVKEFNALIEICIEKARNTDD 127
           KWVFK+TQG R  RLV+ CA KLG +ATIQVFG LGRETGVKE+ AL+ ICIEKAR +DD
Sbjct: 130 KWVFKNTQGGRLDRLVKTCAQKLGTEATIQVFGKLGRETGVKEYKALLGICIEKARTSDD 189

Query: 126 EDVALEEFHRAYMVFETMRERGFEIGEETYGPFLMFIIDMG 4
           E+ +LE+ ++A+ +FE M+E+GF I EETYGPF M++IDMG
Sbjct: 190 EEASLEQIYKAFQLFEEMKEQGFHIEEETYGPFFMYLIDMG 230


>ref|XP_004152030.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Cucumis sativus]
          Length = 1295

 Score =  159 bits (403), Expect = 5e-37
 Identities = 86/236 (36%), Positives = 136/236 (57%), Gaps = 6/236 (2%)
 Frame = -1

Query: 696 NLTRSAITNAAPLTSAAQEVSLKQYIPFTEAVDAXXXXXXXXXXXXXXXXXXXXXSELAV 517
           +L RSAI ++   +  AQ+ +L+ Y+   + +                       S++  
Sbjct: 67  SLVRSAIISSKS-SQNAQDAALQNYVSTIDPLSPSTSLSNAINSPTSKKLPQNPNSDVQF 125

Query: 516 ESIRIDNAASISDSKRKLYSQLNSILCXXXXXXXXXXE------PLVELLDIPWSPTLSH 355
            ++ ++ ++   D  + L   ++S+LC          +       L +LLDIPW    ++
Sbjct: 126 PALILEESSDSGDPTKHLAKAISSVLCEGSSVMSPEAQGNCVEESLEKLLDIPWFSIKTN 185

Query: 354 SCKSLHRREVARWRKQKWVFKSTQGSRFGRLVRLCANKLGADATIQVFGILGRETGVKEF 175
              +LHR+E++R RK  WV K+TQ  RF RLVR CAN+LG+D T++VFG LGRETGVKE+
Sbjct: 186 HSLTLHRKEISRERKHNWVLKNTQSDRFRRLVRSCANRLGSDVTLEVFGKLGRETGVKEY 245

Query: 174 NALIEICIEKARNTDDEDVALEEFHRAYMVFETMRERGFEIGEETYGPFLMFIIDM 7
           NAL+ IC+EKA+ + D +V LE+  + Y +F+ M+E+GF + +ETYGP L  +IDM
Sbjct: 246 NALVGICLEKAKASKDVEVVLEQIGKVYQLFKLMKEQGFSLEDETYGPVLACLIDM 301


>ref|XP_003526188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Glycine max]
          Length = 1117

 Score =  151 bits (381), Expect = 2e-34
 Identities = 67/130 (51%), Positives = 97/130 (74%)
 Frame = -1

Query: 393 ELLDIPWSPTLSHSCKSLHRREVARWRKQKWVFKSTQGSRFGRLVRLCANKLGADATIQV 214
           + +DIPW   LSH   S  R++VAR RKQKW+FK T   RF RL+++CA+KLG   T+ V
Sbjct: 96  QTVDIPWILDLSHGKLSEKRKDVARERKQKWIFKYTSDDRFDRLIKMCADKLGVGKTVNV 155

Query: 213 FGILGRETGVKEFNALIEICIEKARNTDDEDVALEEFHRAYMVFETMRERGFEIGEETYG 34
           FG LGRETGVKE+N LI++C++KAR TDDE + + E  +A+ ++++MR+ G+ + E+TYG
Sbjct: 156 FGQLGRETGVKEYNTLIKMCVKKARATDDEFIGVREMSKAFHLYKSMRDLGYPLEEKTYG 215

Query: 33  PFLMFIIDMG 4
           P L +++DMG
Sbjct: 216 PLLRYLVDMG 225


>ref|XP_002522838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537922|gb|EEF39536.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 867

 Score =  147 bits (371), Expect = 3e-33
 Identities = 71/127 (55%), Positives = 94/127 (74%)
 Frame = -1

Query: 384 DIPWSPTLSHSCKSLHRREVARWRKQKWVFKSTQGSRFGRLVRLCANKLGADATIQVFGI 205
           DIPW   LSH   +  R+EV+R RKQKW+F S Q +RF +L+R+   KLG++A +++F  
Sbjct: 139 DIPWFQNLSHGNVNQQRKEVSRTRKQKWIFSSGQKTRFDQLIRMIDQKLGSEAILELFSK 198

Query: 204 LGRETGVKEFNALIEICIEKARNTDDEDVALEEFHRAYMVFETMRERGFEIGEETYGPFL 25
           LGRETGVKE+NALI+I IEKAR +DD+DVAL+    A+   + M+E GF I EETY PFL
Sbjct: 199 LGRETGVKEYNALIKILIEKARASDDKDVALKHIIVAFEFLKLMKEEGFRIDEETYSPFL 258

Query: 24  MFIIDMG 4
           M++IDMG
Sbjct: 259 MYLIDMG 265


>ref|XP_003574111.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
           mitochondrial-like [Brachypodium distachyon]
          Length = 859

 Score =  144 bits (363), Expect = 2e-32
 Identities = 65/131 (49%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
 Frame = -1

Query: 393 ELLDIPWSPTLSHSCKSLH-RREVARWRKQKWVFKSTQGSRFGRLVRLCANKLGADATIQ 217
           ++LD+ W    + S   +H R+EVAR +K++++FK+T+  RF R++R+CA+KLGA++ ++
Sbjct: 119 KILDMEWFAAPTPSSMMVHLRKEVAREKKKRYIFKNTESRRFTRMMRMCADKLGAESALE 178

Query: 216 VFGILGRETGVKEFNALIEICIEKARNTDDEDVALEEFHRAYMVFETMRERGFEIGEETY 37
            FG LGRETG+KEFNALI +C+EKAR   + D A+E   RAY +FE M +RG++I EE Y
Sbjct: 179 FFGRLGRETGLKEFNALIRVCLEKARACGEVDSAVEHIFRAYRLFEMMNDRGYQIEEEIY 238

Query: 36  GPFLMFIIDMG 4
           GPFL++++D+G
Sbjct: 239 GPFLLYLVDVG 249