BLASTX nr result

ID: Atractylodes21_contig00037577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037577
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   102   3e-20
ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containi...    83   3e-14
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/97 (52%), Positives = 67/97 (69%)
 Frame = +2

Query: 2   VHRSQTQLLFRVYGDMLEMWVGMGVAEKDIFENVIKVLCRVGKVQESRSLIKKAFVNGIK 181
           V  ++ QL+FRVY DM+EM   +  A+    ENVI++LCR GK+QE RSL+KK    G+ 
Sbjct: 249 VQTNEKQLVFRVYLDMVEMGFDLSNADMANLENVIRLLCRDGKIQEGRSLVKKVMGLGLN 308

Query: 182 PTSSVLDAIASGYCEKKDYGDLLSLFAEMDYVPDGVV 292
           P+S +LD IA+GYCEKKD+ D LS F EM+  P  VV
Sbjct: 309 PSSLILDEIANGYCEKKDFEDALSFFVEMNCAPSVVV 345


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Vitis vinifera]
          Length = 1273

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/97 (52%), Positives = 67/97 (69%)
 Frame = +2

Query: 2   VHRSQTQLLFRVYGDMLEMWVGMGVAEKDIFENVIKVLCRVGKVQESRSLIKKAFVNGIK 181
           V  ++ QL+FRVY DM+EM   +  A+    ENVI++LCR GK+QE RSL+KK    G+ 
Sbjct: 266 VQTNEKQLVFRVYLDMVEMGFDLSNADMANLENVIRLLCRDGKIQEGRSLVKKVMGLGLN 325

Query: 182 PTSSVLDAIASGYCEKKDYGDLLSLFAEMDYVPDGVV 292
           P+S +LD IA+GYCEKKD+ D LS F EM+  P  VV
Sbjct: 326 PSSLILDEIANGYCEKKDFEDALSFFVEMNCAPSVVV 362


>ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Cucumis sativus]
          Length = 1225

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/94 (44%), Positives = 59/94 (62%)
 Frame = +2

Query: 2   VHRSQTQLLFRVYGDMLEMWVGMGVAEKDIFENVIKVLCRVGKVQESRSLIKKAFVNGIK 181
           V + +TQ+   V  DM+EM  G+G  EK  F+NVI++LC  G V E+R+L+KK      +
Sbjct: 237 VQKKKTQVALAVCTDMVEMGFGLGDEEKASFDNVIRLLCWQGNVLEARNLVKKFVALDFR 296

Query: 182 PTSSVLDAIASGYCEKKDYGDLLSLFAEMDYVPD 283
           P+  VL  I  GYC+KKD+ DLLS F E+   P+
Sbjct: 297 PSDEVLYQITRGYCDKKDFEDLLSFFFEIKTPPN 330


>ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Cucumis sativus]
          Length = 1246

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/94 (44%), Positives = 59/94 (62%)
 Frame = +2

Query: 2   VHRSQTQLLFRVYGDMLEMWVGMGVAEKDIFENVIKVLCRVGKVQESRSLIKKAFVNGIK 181
           V + +TQ+   V  DM+EM  G+G  EK  F+NVI++LC  G V E+R+L+KK      +
Sbjct: 237 VQKKKTQVALAVCTDMVEMGFGLGDEEKASFDNVIRLLCWQGNVLEARNLVKKFVALDFR 296

Query: 182 PTSSVLDAIASGYCEKKDYGDLLSLFAEMDYVPD 283
           P+  VL  I  GYC+KKD+ DLLS F E+   P+
Sbjct: 297 PSDEVLYQITRGYCDKKDFEDLLSFFFEIKTPPN 330


>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
           predicted protein [Populus trichocarpa]
          Length = 1158

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 40/94 (42%), Positives = 61/94 (64%)
 Frame = +2

Query: 2   VHRSQTQLLFRVYGDMLEMWVGMGVAEKDIFENVIKVLCRVGKVQESRSLIKKAFVNGIK 181
           V   +TQL FRV  D++E+ + +   E   FENV+++LCR G ++E+R+ I+K    G +
Sbjct: 152 VRMKRTQLAFRVSLDLVELGISVSEGENASFENVVRLLCRDGMIREARNFIRKLMALGFE 211

Query: 182 PTSSVLDAIASGYCEKKDYGDLLSLFAEMDYVPD 283
           P+S VL+ IA GYCE +D+ D +  FAEM   P+
Sbjct: 212 PSSLVLNEIALGYCE-QDFEDSVRCFAEMKCSPN 244


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