BLASTX nr result

ID: Atractylodes21_contig00037571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037571
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    68   7e-10
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    65   7e-09
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    64   1e-08
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    58   7e-07
gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK...    57   2e-06

>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/58 (58%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = -1

Query: 205 RNRGFRSLTRTEWEERRRKGLCFRCGLVFGPT-HKCSEGALRVLLLADDEFVTEEGEI 35
           R +G RS+   E+EERR KGLCF+CG  + PT HKC E ALRVL+L + E +T+EGEI
Sbjct: 311 RWKGIRSIHNEEFEERRAKGLCFKCGGKYHPTFHKCLERALRVLILGEGETMTKEGEI 368


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = -1

Query: 199 RGFRSLTRTEWEERRRKGLCFRCGLVFGPT-HKCSEGALRVLLLADDEFVTEEGEIRGHE 23
           +G RS+   E  ERR KGLCF+CG  + PT HKC E ALRVL+L + E + +EGEI   E
Sbjct: 297 KGVRSIRNNEMAERRAKGLCFKCGGKYHPTLHKCPERALRVLILGEGEALNDEGEIMAME 356


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
 Frame = -1

Query: 205  RNRGFRSLTRTEWEERRRKGLCFRCGLVFGPT-HKCSEGALRVLLLADDEFVTEEGEI 35
            R +G RS+   E  ERR KGLCF+CG  + PT HKC E +LRVL+L + E V EEGEI
Sbjct: 920  RWKGVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEI 977


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = -1

Query: 205 RNRGFRSLTRTEWEERRRKGLCFRCGLVFGPTHKCSEGALRVLLLADDEFVTEEGEI 35
           R+R F  L+  E  ER++KGLCF+CG  F P H+C +  LRVL+L +DE    EG++
Sbjct: 92  RDRSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVLVLEEDEEGEPEGKL 148


>gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK46949.1| unknown
           [Medicago truncatula]
          Length = 185

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/44 (63%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = -1

Query: 163 ERRRKGLCFRCGLVFGPT-HKCSEGALRVLLLADDEFVTEEGEI 35
           ERR KGLCF+CG  + PT HKC E +LRVL+L + E V EEGEI
Sbjct: 3   ERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEI 46


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