BLASTX nr result

ID: Atractylodes21_contig00037548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00037548
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi...   111   7e-23
emb|CBI18516.3| unnamed protein product [Vitis vinifera]              111   7e-23
emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]   111   7e-23
ref|XP_002522775.1| pentatricopeptide repeat-containing protein,...   108   5e-22
ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   108   6e-22

>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/87 (58%), Positives = 66/87 (75%)
 Frame = +1

Query: 1    ASFCKNKRVGEAVEFLNHMGRIGIVPNTSTFDCIINCYVSMGNGLKALSFFEEMVNLGHQ 180
            +S C++ ++GEA +FL HM RIG+VPN+ T+DCIIN Y S+G+ L A SFF++M+  G  
Sbjct: 1307 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH 1366

Query: 181  PSSYTYGSLLKALCYGGNFEEAMKFLN 261
            PS +TYGSLLK LC GGN  EA KFLN
Sbjct: 1367 PSFFTYGSLLKGLCKGGNLVEAKKFLN 1393


>emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/87 (58%), Positives = 66/87 (75%)
 Frame = +1

Query: 1   ASFCKNKRVGEAVEFLNHMGRIGIVPNTSTFDCIINCYVSMGNGLKALSFFEEMVNLGHQ 180
           +S C++ ++GEA +FL HM RIG+VPN+ T+DCIIN Y S+G+ L A SFF++M+  G  
Sbjct: 439 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH 498

Query: 181 PSSYTYGSLLKALCYGGNFEEAMKFLN 261
           PS +TYGSLLK LC GGN  EA KFLN
Sbjct: 499 PSFFTYGSLLKGLCKGGNLVEAKKFLN 525


>emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  111 bits (277), Expect = 7e-23
 Identities = 51/87 (58%), Positives = 66/87 (75%)
 Frame = +1

Query: 1   ASFCKNKRVGEAVEFLNHMGRIGIVPNTSTFDCIINCYVSMGNGLKALSFFEEMVNLGHQ 180
           +S C++ ++GEA +FL HM RIG+VPN+ T+DCIIN Y S+G+ L A SFF++M+  G  
Sbjct: 556 SSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQH 615

Query: 181 PSSYTYGSLLKALCYGGNFEEAMKFLN 261
           PS +TYGSLLK LC GGN  EA KFLN
Sbjct: 616 PSFFTYGSLLKGLCKGGNLVEAKKFLN 642


>ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538013|gb|EEF39626.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1071

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/87 (57%), Positives = 63/87 (72%)
 Frame = +1

Query: 1   ASFCKNKRVGEAVEFLNHMGRIGIVPNTSTFDCIINCYVSMGNGLKALSFFEEMVNLGHQ 180
           +S CK+ +VG A  F +HM +IG VPN+ TFDCIIN Y + GNGLKA S F+EM+  GH 
Sbjct: 491 SSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHH 550

Query: 181 PSSYTYGSLLKALCYGGNFEEAMKFLN 261
           PS +TYG LLKALC  G F+EA + L+
Sbjct: 551 PSHFTYGGLLKALCRAGKFKEAKRLLD 577



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/83 (37%), Positives = 43/83 (51%)
 Frame = +1

Query: 10  CKNKRVGEAVEFLNHMGRIGIVPNTSTFDCIINCYVSMGNGLKALSFFEEMVNLGHQPSS 189
           CKN R  +    L  M +  I PN  T++ IIN +V  G    A   F+EM  L   P+ 
Sbjct: 249 CKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNC 308

Query: 190 YTYGSLLKALCYGGNFEEAMKFL 258
            TY +L+   C+ GNFE+A+  L
Sbjct: 309 VTYNALIDGHCHDGNFEQALTIL 331


>ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/86 (58%), Positives = 65/86 (75%)
 Frame = +1

Query: 1   ASFCKNKRVGEAVEFLNHMGRIGIVPNTSTFDCIINCYVSMGNGLKALSFFEEMVNLGHQ 180
           AS C+N ++ EA EFL+H+ RIG+VPN+ TFDCIIN Y ++G+G  A S F++M++ GH 
Sbjct: 498 ASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHH 557

Query: 181 PSSYTYGSLLKALCYGGNFEEAMKFL 258
           PS +TYGSLLK LC G NF EA K L
Sbjct: 558 PSPFTYGSLLKVLCKGQNFWEARKLL 583



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/86 (34%), Positives = 43/86 (50%)
 Frame = +1

Query: 4   SFCKNKRVGEAVEFLNHMGRIGIVPNTSTFDCIINCYVSMGNGLKALSFFEEMVNLGHQP 183
           S C+N R  +    L  M    I PN  +++ +IN +V  G    A   F EM+ L   P
Sbjct: 254 SLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSP 313

Query: 184 SSYTYGSLLKALCYGGNFEEAMKFLN 261
           +  TY  L+   C  GNFEEA++ L+
Sbjct: 314 NLITYNILINGYCINGNFEEALRLLD 339


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